RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZCCHC9Q8N567 271 aaKnown RBP8.86□□□□□ -0.99
PTCD3-201ENST00000254630 WNT8BQ93098 351 aa8.86□□□□□ -0.99
PTCD3-201ENST00000254630 SIGLEC16A6NMB1 481 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TNFSF9P41273 254 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 MAGEA10P43363 369 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 KCNT2Q6UVM3 1135 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 CXCL17Q6UXB2 119 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ILDR1Q86SU0 546 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TRAPPC5Q8IUR0 188 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 PSTKQ8IV42 348 aaKnown RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ATG16L2Q8NAA4 619 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TRPM4Q8TD43 1214 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ASB2Q96Q27 587 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SLC39A8Q9C0K1 460 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TCF7L2Q9NQB0 619 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ADPRHL2Q9NX46 363 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 NFKBIL1Q9UBC1 381 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 OPTCQ9UBM4 332 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 H3BMM5 538 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 KCNH1O95259 989 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 FGF19O95750 216 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 DLGAP3O95886 979 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ENO2P09104 434 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ALADP13716 330 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 RBL1P28749 1068 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TKTP29401 623 aaKnown RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 MAMLD1Q13495 774 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 INSCQ1MX18 579 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 USP41Q3LFD5 358 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 NECAB2Q7Z6G3 386 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ELMO1Q92556 727 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 USP6NLQ92738 828 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 DEPDC7Q96QD5 511 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TSPAN18Q96SJ8 248 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ZFYVE1Q9HBF4 777 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 NUDT5Q9UKK9 219 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ENTPD4Q9Y227 616 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 NDUFAF1Q9Y375 327 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 NCANO14594 1321 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.996e-15■■■■□ 25.2
PTCD3-201ENST00000254630 PGK1P00558 417 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ATP6V1B1P15313 513 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 NTSP30990 170 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 GPR15P49685 360 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 IRX1P78414 480 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SPIDRQ14159 915 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SYT12Q8IV01 421 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 MICU2Q8IYU8 434 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 MYCBPAPQ8TBZ2 947 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 RSPH1Q8WYR4 309 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ZYG11BQ9C0D3 744 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ANKZF1Q9H8Y5 726 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 PTPRHQ9HD43 1115 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 BATF3Q9NR55 127 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SOHLH2Q9NX45 425 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 MORF4L1Q9UBU8 362 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 CRYL1Q9Y2S2 319 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 PCDHAC2Q9Y5I4 1007 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 A0A096LPK6 155 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TBC1D3BA6NDS4 549 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SPATA31C2B4DYI2 1134 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 APOC4-APOC2K7ER74 178 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 APOC2P02655 101 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 CLTBP09497 229 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 GNA13Q14344 377 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 C16orf72Q14CZ0 275 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 PCID2Q5JVF3 399 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 IL27RAQ6UWB1 636 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 OXNAD1Q96HP4 312 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 MRIQ9BWK5 157 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 THAP1Q9NVV9 213 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 AKAP7Q9P0M2 348 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 ATRNO75882 1429 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 C1QTNF3-AMACRE9PGA6 284 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 PABPC1P11940 636 aaKnown RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 JAK1P23458 1154 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 C15orf59Q2T9L4 293 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 RAET1GQ6H3X3 334 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 RGMBQ6NW40 437 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 KIAA1324Q6UXG2 1013 aaKnown RBP8.85□□□□□ -0.99
PTCD3-201ENST00000254630 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 TCP10LQ8TDR4 215 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SPACA7Q96KW9 195 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 CROTQ9UKG9 612 aa8.85□□□□□ -0.99
PTCD3-201ENST00000254630 SAC3D1A6NKF1 404 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 IRF6O14896 467 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PLSCR1O15162 318 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 GNRH1P01148 92 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 COX7A2P14406 83 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PTPN4P29074 926 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 RPL9P32969 192 aaKnown RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CYP2C18P33260 490 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CCL23P55773 120 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 GTF2BQ00403 316 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 TMC3Q7Z5M5 1100 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 KIAA0319LQ8IZA0 1049 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 KYQ8NBH2 561 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms