RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 ECHS1P30084 290 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 PTPN9P43378 593 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 PDE1BQ01064 536 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 DSC2Q02487 901 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF844Q08AG5 666 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 GPM6BQ13491 265 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 PDK1Q15118 436 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 TEAD2Q15562 447 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 NAPRTQ6XQN6 538 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 SGF29Q96ES7 293 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 DNMT3LQ9UJW3 386 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 INSL5Q9Y5Q6 135 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 DNALI1O14645 258 aaPredicted RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ADH1AP07327 375 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 CCNB1P14635 433 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 ATXN7L2Q5T6C5 722 aaPredicted RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 DDX53Q86TM3 631 aaKnown RBP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 CYP4X1Q8N118 509 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.92□□□□□ -0.5
LIN28A-201ENST00000254231 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
LIN28A-201ENST00000254231 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 C1RP00736 705 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 INHBAP08476 426 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 SLC11A2P49281 568 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ENPEPQ07075 957 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 PPP2R5EQ16537 467 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ARMC12Q5T9G4 340 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 CDKL3Q8IVW4 592 aaPredicted RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 TBC1D31Q96DN5 1066 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MOCOSQ96EN8 888 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MFSD3Q96ES6 412 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 RAD9AQ99638 391 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 CHRAC1Q9NRG0 131 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 CIDEBQ9UHD4 219 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 RIPK2O43353 540 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 KLKB1P03952 638 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 COL6A1P12109 1028 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 CTPS1P17812 591 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 NR1D1P20393 614 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 CA4P22748 312 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MSH2P43246 934 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 TNK2Q07912 1038 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 KBTBD12Q3ZCT8 623 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 HSP90AA5PQ58FG0 334 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 SLC45A4Q5BKX6 768 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MS4A13Q5J8X5 152 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 LRRC38Q5VT99 294 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 RNF219Q5W0B1 726 aaPredicted RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 PPIL6Q8IXY8 311 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ATP6V0D2Q8N8Y2 350 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 SKA2Q8WVK7 121 aaPredicted RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 PABPC3Q9H361 631 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ASAH2Q9NR71 780 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 FCF1Q9Y324 198 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 PRRC2CQ9Y520 2896 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 A0A1W2PPM1 405 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 VNN2O95498 520 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 MT-CO1P00395 513 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 GRM2Q14416 872 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 OASLQ15646 514 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ADGRD2Q7Z7M1 963 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 PRPF39Q86UA1 669 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 SLC35B2Q8TB61 432 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ATP2A3Q93084 1043 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
LIN28A-201ENST00000254231 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF840PA6NDX5 716 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 TNFRSF10BO14763 440 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 CYP11A1P05108 521 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 RHOCP08134 193 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 CSH1P0DML2 217 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 CSH2P0DML3 217 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 BRAFP15056 766 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 ITGB6P18564 788 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 AARSP49588 968 aaKnown RBP eCLIP11.9□□□□□ -0.5
LIN28A-201ENST00000254231 TUBB4BP68371 445 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 DPYSL2Q16555 572 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 C16orf46Q6P387 395 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 PTAR1Q7Z6K3 402 aaPredicted RBP11.9□□□□□ -0.5
LIN28A-201ENST00000254231 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 MCUQ8NE86 351 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 VPS11Q9H270 941 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 ADAM7Q9H2U9 754 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 ZDHHC18Q9NUE0 388 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 MZF1P28698 734 aaPredicted RBP11.9□□□□□ -0.5
LIN28A-201ENST00000254231 GLRBP48167 497 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 ITIH3Q06033 890 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 PKN2Q16513 984 aaKnown RBP11.9□□□□□ -0.5
LIN28A-201ENST00000254231 RAPH1Q70E73 1250 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 GANCQ8TET4 914 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 KCTD13Q8WZ19 329 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 SMG7Q92540 1137 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms