RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CASP10Q92851 521 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 B3GALT6Q96L58 329 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 RAB3IPQ96QF0 476 aaPredicted RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 EIF2B3Q9NR50 452 aaKnown RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 ALDH1A2O94788 518 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SCAPQ12770 1279 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 TUSC3Q13454 348 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 DDR2Q16832 855 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 TEX44Q53QW1 395 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 DCLK2Q8N568 766 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 AGR3Q8TD06 166 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 C20orf96Q9NUD7 363 aaPredicted RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 TMEM216Q9P0N5 145 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SIRPGQ9P1W8 387 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 C9IYK1 514 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 SNUPNO95149 360 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 ENO1P06733 434 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 ARPP19P56211 112 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 TSPY1Q01534 308 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 MRPL10Q7Z7H8 261 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 CRLF3Q8IUI8 442 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 CNTD1Q8N815 330 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 IPMKQ8NFU5 416 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 TTC8Q8TAM2 541 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 MAGEC3Q8TD91 643 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 ZNF419Q96HQ0 510 aaPredicted RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 UNKQ9C0B0 810 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 IARS2Q9NSE4 1012 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 MTO1Q9Y2Z2 717 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 ENTPD5O75356 428 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 PAGE1O75459 146 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 SOAT2O75908 522 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 F9P00740 461 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 PYGLP06737 847 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 GM2AP17900 193 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 IRF9Q00978 393 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 USP4Q13107 963 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 C10orf107Q8IVU9 208 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 PLD6Q8N2A8 252 aaKnown RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 SKA1Q96BD8 255 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 TRPV6Q9H1D0 765 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 NMUR1Q9HB89 426 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 CSNK1G1Q9HCP0 422 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 NKX1-2Q9UD57 310 aaPredicted RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 MX2P20592 715 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 NMBRP28336 390 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 GRK4P32298 578 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 OR1G1P47890 313 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 OCRLQ01968 901 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 YWHAHQ04917 246 aaPredicted RBP16.09■□□□□ 0.17
LRFN1-201ENST00000248668 POU6F1Q14863 301 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 GBA3Q9H227 469 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 LRRC40Q9H9A6 602 aa16.09■□□□□ 0.17
LRFN1-201ENST00000248668 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.17
LRFN1-201ENST00000248668 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.17
LRFN1-201ENST00000248668 ATP5HO75947 161 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 DDHD2O94830 711 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 SERPINB6P35237 376 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 KDSRQ06136 332 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 GALNT2Q10471 571 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 ITGA7Q13683 1181 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 ANKRD20A4Q4UJ75 823 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 THEM5Q8N1Q8 247 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 SNX15Q9NRS6 342 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 DNAJC16Q9Y2G8 782 aa16.08■□□□□ 0.17
LRFN1-201ENST00000248668 TSC2P49815 1807 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 GSRP00390 522 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 ESRRAP11474 423 aaPredicted RBP16.08■□□□□ 0.16
LRFN1-201ENST00000248668 GP5P40197 560 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 RIPK1Q13546 671 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 ATG14Q6ZNE5 492 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 PNPLA1Q8N8W4 532 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 FBXO27Q8NI29 283 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 ZNF398Q8TD17 642 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 ATP2A3Q93084 1043 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 HDAC11Q96DB2 347 aa16.08■□□□□ 0.16
LRFN1-201ENST00000248668 FCRL2Q96LA5 508 aaPredicted RBP16.08■□□□□ 0.16
LRFN1-201ENST00000248668 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 CA12O43570 354 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 PLIN3O60664 434 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 PMPCBO75439 489 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 PTPN4P29074 926 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 TFAP2DQ7Z6R9 452 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 TREML1Q86YW5 311 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 TTC9BQ8N6N2 239 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 CADM1Q9BY67 442 aaKnown RBP16.07■□□□□ 0.16
LRFN1-201ENST00000248668 DNAJB4Q9UDY4 337 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 HBS1LQ9Y450 684 aaKnown RBP16.07■□□□□ 0.16
LRFN1-201ENST00000248668 ZCWPW2A0A1B0GU75 182 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 GYG2O15488 501 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 AVPR1AP37288 418 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 RASSF2P50749 326 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 ITGA9Q13797 1035 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 UBAP2LQ14157 1087 aaKnown RBP16.07■□□□□ 0.16
LRFN1-201ENST00000248668 PM20D1Q6GTS8 502 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 C14orf80Q86SX3 495 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms