RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RSPH14Q9UHP6 348 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 ZMYM5Q9UJ78 669 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 ZNF510Q9Y2H8 683 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 NR2E3Q9Y5X4 410 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 MKI67P46013 3256 aaKnown RBP14.52□□□□□ -0.09
SDF2-201ENST00000247020 RASA4BC9J798 803 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 RASA4O43374 803 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 RAMP2O60895 175 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 CLDN11O75508 207 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 CNTN5O94779 1100 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 AP2A1O95782 977 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 SPATA31D3P0C874 917 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 ERVK-21P61565 698 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 GAD2Q05329 585 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 ZBTB17Q13105 803 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 HNRNPDQ14103 355 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 FASTKD3Q14CZ7 662 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 MSS51Q4VC12 460 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 ELMSAN1Q6PJG2 1045 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 SPATA31D4Q6ZUB0 917 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 ZNF534Q76KX8 674 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 CCNJLQ8IV13 435 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 PALM2Q8IXS6 379 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 LGI2Q8N0V4 545 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 TLCD1Q96CP7 247 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 IPO11Q9UI26 975 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 A0A1B0GVM2 712 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 TCAF2A6NFQ2 919 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 A6NNZ2 444 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 H3BNC9 293 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 RGS16O15492 202 aaPredicted RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 ZBTB24O43167 697 aaPredicted RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 CDH16O75309 829 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 HDCP19113 662 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 SLC6A4P31645 630 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 CD68P34810 354 aaPredicted RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 ELK3P41970 407 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 MMP13P45452 471 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 GABPB1Q06547 395 aaPredicted RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 POLD3Q15054 466 aaPredicted RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 KLHL38Q2WGJ6 581 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 TUBB8Q3ZCM7 444 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 TNFAIP8L3Q5GJ75 292 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 UBAP2Q5T6F2 1119 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 KCTD11Q693B1 232 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 GAREM2Q75VX8 874 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 DENND1CQ8IV53 801 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 FAM217AQ8IXS0 508 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 CNPY4Q8N129 248 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 ARFGAP2Q8N6H7 521 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 DEPDC1BQ8WUY9 529 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 FCRL5Q96RD9 977 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 NAT9Q9BTE0 207 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 LMAN2LQ9H0V9 348 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 MAGEH1Q9H213 219 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 LRRC40Q9H9A6 602 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 VPS37BQ9H9H4 285 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 TRPC7Q9HCX4 862 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 LGALS13Q9UHV8 139 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 SLC24A2Q9UI40 661 aa14.51□□□□□ -0.09
SDF2-201ENST00000247020 LSM7Q9UK45 103 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 AGO1Q9UL18 857 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 AAR2Q9Y312 384 aaKnown RBP14.51□□□□□ -0.09
SDF2-201ENST00000247020 ATG2AQ2TAZ0 1938 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 TRAV19A0A0A6YYK7 116 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 GOLGA6L7A0A1B0GV03 622 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 POLR3GO15318 223 aaPredicted RBP14.5□□□□□ -0.09
SDF2-201ENST00000247020 ANXA9O76027 345 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 JCHAINP01591 159 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 KLKB1P03952 638 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 CA3P07451 260 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 PTPN2P17706 415 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 NFKB1P19838 968 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 OR1E1P30953 314 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 RENBPP51606 427 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 IRAK1P51617 712 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 SMAD3P84022 425 aaKnown RBP14.5□□□□□ -0.09
SDF2-201ENST00000247020 IL10RBQ08334 325 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 SERINC3Q13530 473 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 CAMK1Q14012 370 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 C9orf50Q5SZB4 431 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 ARMC3Q5W041 872 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 ZNF783Q6ZMS7 281 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 Q6ZNB5 142 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 TFAP2DQ7Z6R9 452 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 LINC00523Q86TU6 105 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 SETD3Q86TU7 594 aaPredicted RBP14.5□□□□□ -0.09
SDF2-201ENST00000247020 PDCD7Q8N8D1 485 aaKnown RBP14.5□□□□□ -0.09
SDF2-201ENST00000247020 MICAL1Q8TDZ2 1067 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 NSMCE1Q8WV22 266 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 HMCESQ96FZ2 354 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 SIGLEC10Q96LC7 697 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 ZNF599Q96NL3 588 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 WDR83Q9BRX9 315 aaKnown RBP14.5□□□□□ -0.09
SDF2-201ENST00000247020 CEP41Q9BYV8 373 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 ACSS3Q9H6R3 686 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 SP110Q9HB58 689 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 GKN1Q9NS71 199 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 HAUS2Q9NVX0 235 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms