RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 HACD3Q9P035 362 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PRPF19Q9UMS4 504 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 DOLKQ9UPQ8 538 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 MAFBQ9Y5Q3 323 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TRIM49D1C9J1S8 452 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 H0YC42 278 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 H0YJX3 145 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 H3BRJ5 948 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 IL1R2P27930 398 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 MAGEA12P43365 314 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 ENTPD1P49961 510 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 NR1H2P55055 460 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TPD52P55327 224 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 P2RX3P56373 397 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PPP2R2BQ00005 443 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PRKCEQ02156 737 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 GAD2Q05329 585 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TRAP1Q12931 704 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 LLGL1Q15334 1064 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 MAPRE2Q15555 327 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 NOL9Q5SY16 702 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 MBLAC2Q68D91 279 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 ADAMTSL2Q86TH1 951 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TTC7BQ86TV6 843 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 XYLT1Q86Y38 959 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PPP4R1Q8TF05 950 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PRMT6Q96LA8 375 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 LRGUKQ96M69 825 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TBCBQ99426 244 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 POLMQ9NP87 494 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 EIF2B3Q9NR50 452 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 GABBR1Q9UBS5 961 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 RSL24D1Q9UHA3 163 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TMEM150BA6NC51 233 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 TRIM64BA6NI03 449 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 ITM2AO43736 263 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 GLRA3O75311 464 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 H2AFYO75367 372 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 BANF1O75531 89 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 EGFRP00533 1210 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 OSBPP22059 807 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 NUDT1P36639 197 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 ASPAP45381 313 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 CBX5P45973 191 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 HSPA13P48723 471 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 HARS2P49590 506 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 MLLT6P55198 1093 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 CCNIQ14094 377 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PDK3Q15120 406 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 DCAF6Q58WW2 860 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 GPAT2Q6NUI2 795 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 CYP4V2Q6ZWL3 525 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PRPF39Q86UA1 669 aaKnown RBP6.43□□□□□ -1.38
SGIP1-201ENST00000237247 RTKN2Q8IZC4 609 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PDZD8Q8NEN9 1154 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 SLC7A3Q8WY07 619 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 MSTO1Q9BUK6 570 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 SERHL2Q9H4I8 314 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 CISHQ9NSE2 258 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 ASNSD1Q9NWL6 643 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 SLC9A2Q9UBY0 812 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 RAB26Q9ULW5 256 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 PCDHA11Q9Y5I1 949 aa6.43□□□□□ -1.38
SGIP1-201ENST00000237247 ARPC4-TTLL3A0A0A6YYG9 625 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 SPATA31C2B4DYI2 1134 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 TSPAN9O75954 239 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 STAMBPO95630 424 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 STAU1O95793 577 aaKnown RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 GSRP00390 522 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 IFNB1P01574 187 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 S100BP04271 92 aaPredicted RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 C8BP07358 591 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 RBP3P10745 1247 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 KRT3P12035 628 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 RCVRNP35243 200 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 GJC1P36383 396 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 ZNF143P52747 638 aaPredicted RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 EFNA5P52803 228 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 RPS6P62753 249 aaKnown RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 C16orf72Q14CZ0 275 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 RGS21Q2M5E4 152 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 PTPN20Q4JDL3 420 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 CCDC58Q4VC31 144 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 C4orf46Q504U0 113 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 C1orf146Q5VVC0 180 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 CES4AQ5XG92 561 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 CDHR3Q6ZTQ4 885 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 DCP2Q8IU60 420 aaKnown RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 GALNT6Q8NCL4 622 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 PLEKHA8Q96JA3 519 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 MUC3BQ9H195 1237 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 RUBCNLQ9H714 662 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 SIAEQ9HAT2 523 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 JPH1Q9HDC5 661 aaPredicted RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 PPARGC1AQ9UBK2 798 aaKnown RBP6.42□□□□□ -1.38
SGIP1-201ENST00000237247 PPM1HQ9ULR3 514 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 ANGPTL3Q9Y5C1 460 aa6.42□□□□□ -1.38
SGIP1-201ENST00000237247 C15orf38-AP3S2A0A0A6YYH1 394 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms