RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GAD1Q99259 594 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 DNAJB4Q9UDY4 337 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 OR12D3Q9UGF7 316 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 ANGPTL2Q9UKU9 493 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 ST3GAL5Q9UNP4 418 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 ANKRD6Q9Y2G4 727 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 PCDHB12Q9Y5F1 795 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 CDY1Q9Y6F8 540 aa22.45■■□□□ 1.18
SMARCD2-201ENST00000225742 DNAJB1P25685 340 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 CPA2P48052 419 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 CLCNKBP51801 687 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 KDSRQ06136 332 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 PPM1JQ5JR12 505 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 MRPL10Q7Z7H8 261 aaKnown RBP22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 ZNF333Q96JL9 665 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 GPAMQ9HCL2 828 aa22.44■■□□□ 1.18
SMARCD2-201ENST00000225742 CACNG3O60359 315 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 IGHA2P01877 340 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 ODC1P11926 461 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 NFKB1P19838 968 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 IDH3AP50213 366 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 PRKAA2P54646 552 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 CDH17Q12864 832 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 MUM1Q2TAK8 710 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 FSTL4Q6MZW2 842 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 METTL23Q86XA0 190 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 DPF3Q92784 378 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 PPP1R2P1Q96PQ5 205 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 ACBD6Q9BR61 282 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 MCMBPQ9BTE3 642 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 TKTL2Q9H0I9 626 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 ARHGAP42A6NI28 874 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 SRGAP2BP0DMP2 458 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 PRDX6P30041 224 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 ZBTB17Q13105 803 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 THOC5Q13769 683 aaKnown RBP22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 SNX30Q5VWJ9 437 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 FAM171BQ6P995 826 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 LRRC74BQ6ZQY2 392 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 KCNMB4Q86W47 210 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 ULK2Q8IYT8 1036 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 PPFIBP2Q8ND30 876 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 RDH11Q8TC12 318 aa22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 MTG1Q9BT17 334 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-201ENST00000225742 A0A096LPK6 155 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 HK2P52789 917 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 MXRA7P84157 204 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 MPP3Q13368 585 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 UBAP2LQ14157 1087 aaKnown RBP22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 URGCPQ8TCY9 931 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 MYLPFQ96A32 169 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 APBA2Q99767 749 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 DSEQ9UL01 958 aa22.42■■□□□ 1.18
SMARCD2-201ENST00000225742 ARL5CA6NH57 179 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 ZNF195O14628 629 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 KIF1CO43896 1103 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 USP12O75317 370 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 LRIG2O94898 1065 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CYP11A1P05108 521 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 IGFBP6P24592 240 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CCNCP24863 283 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 POLD2P49005 469 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CACNA2D1P54289 1103 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 ACTR3P61158 418 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 ITGA9Q13797 1035 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CCL14Q16627 93 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 UPP1Q16831 310 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 PDPK2PQ6A1A2 396 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CMC1Q7Z7K0 106 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CCDC117Q8IWD4 279 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 KIFC1Q9BW19 673 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 C20orf96Q9NUD7 363 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 TMEM30AQ9NV96 361 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 PNPOQ9NVS9 261 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 NMRK1Q9NWW6 199 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 MIOSQ9NXC5 875 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CORO1CQ9ULV4 474 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 AAR2Q9Y312 384 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 DOCK3Q8IZD9 2030 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 MEIS3P2A8K0S8 358 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 SIN3BO75182 1162 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 AMHP03971 560 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 C6orf222P0C671 652 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 AKR1A1P14550 325 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 HSP90AA5PQ58FG0 334 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 FSCBQ5H9T9 825 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CERCAMQ5T4B2 595 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 METTL21CQ5VZV1 264 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 TAC4Q86UU9 113 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 MYLK4Q86YV6 388 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 FBXO27Q8NI29 283 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 ZSCAN18Q8TBC5 510 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 STON2Q8WXE9 905 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 SOCS4Q8WXH5 440 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 CMTM5Q96DZ9 223 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 THTPAQ9BU02 230 aa22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 SENP6Q9GZR1 1112 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 DMAP1Q9NPF5 467 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 TIMM13Q9Y5L4 95 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-201ENST00000225742 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms