RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NDFIP2Q9NV92 336 aa13.02□□□□□ -0.33
LSM5-201ENST00000223084 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
LSM5-201ENST00000223084 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 NUP205Q92621 2012 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 DMDP11532 3685 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 LRCH4O75427 683 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 VAV1P15498 845 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 TCF4P15884 667 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 GLDCP23378 1020 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 L1CAMP32004 1257 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 ACVRL1P37023 503 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 FOXK2Q01167 660 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 SULT2A1Q06520 285 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 C6orf118Q5T5N4 469 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 CYP4V2Q6ZWL3 525 aaPredicted RBP13.01□□□□□ -0.33
LSM5-201ENST00000223084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
LSM5-201ENST00000223084 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
LSM5-201ENST00000223084 OR2T3Q8NH03 318 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 SPON2Q9BUD6 331 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
LSM5-201ENST00000223084 NCDNQ9UBB6 729 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 SUN2Q9UH99 717 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 DNAI1Q9UI46 699 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 ANAPC7Q9UJX3 599 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 CYP8B1Q9UNU6 501 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 AP4E1Q9UPM8 1137 aa13.01□□□□□ -0.33
LSM5-201ENST00000223084 WDR87Q6ZQQ6 2873 aa13□□□□□ -0.33
LSM5-201ENST00000223084 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
LSM5-201ENST00000223084 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13□□□□□ -0.33
LSM5-201ENST00000223084 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
LSM5-201ENST00000223084 ILVBLA1L0T0 632 aa13□□□□□ -0.33
LSM5-201ENST00000223084 PRPSAP2O60256 369 aa13□□□□□ -0.33
LSM5-201ENST00000223084 SIN3BO75182 1162 aa13□□□□□ -0.33
LSM5-201ENST00000223084 MT-CO1P00395 513 aa13□□□□□ -0.33
LSM5-201ENST00000223084 H2AFZP0C0S5 128 aa13□□□□□ -0.33
LSM5-201ENST00000223084 RHOQP17081 205 aa13□□□□□ -0.33
LSM5-201ENST00000223084 IL1R2P27930 398 aa13□□□□□ -0.33
LSM5-201ENST00000223084 EPHB2P29323 1055 aa13□□□□□ -0.33
LSM5-201ENST00000223084 AIF1P55008 147 aa13□□□□□ -0.33
LSM5-201ENST00000223084 SEMA3BQ13214 749 aa13□□□□□ -0.33
LSM5-201ENST00000223084 HNRNPA1L2Q32P51 320 aaKnown RBP13□□□□□ -0.33
LSM5-201ENST00000223084 ERMARDQ5T6L9 678 aa13□□□□□ -0.33
LSM5-201ENST00000223084 C9orf64Q5T6V5 341 aa13□□□□□ -0.33
LSM5-201ENST00000223084 LAIR1Q6GTX8 287 aa13□□□□□ -0.33
LSM5-201ENST00000223084 LINGO4Q6UY18 593 aa13□□□□□ -0.33
LSM5-201ENST00000223084 H2AFVQ71UI9 128 aa13□□□□□ -0.33
LSM5-201ENST00000223084 CPNE8Q86YQ8 564 aa13□□□□□ -0.33
LSM5-201ENST00000223084 TMEFF1Q8IYR6 380 aa13□□□□□ -0.33
LSM5-201ENST00000223084 DEFB119Q8N690 84 aa13□□□□□ -0.33
LSM5-201ENST00000223084 ZNF564Q8TBZ8 553 aaPredicted RBP13□□□□□ -0.33
LSM5-201ENST00000223084 RUBCNQ92622 972 aa13□□□□□ -0.33
LSM5-201ENST00000223084 PRCCQ92733 491 aaPredicted RBP13□□□□□ -0.33
LSM5-201ENST00000223084 PTPRN2Q92932 1015 aa13□□□□□ -0.33
LSM5-201ENST00000223084 SIPA1Q96FS4 1042 aa13□□□□□ -0.33
LSM5-201ENST00000223084 SPACA7Q96KW9 195 aa13□□□□□ -0.33
LSM5-201ENST00000223084 PPP1R9BQ96SB3 815 aa13□□□□□ -0.33
LSM5-201ENST00000223084 KCTD15Q96SI1 283 aaPredicted RBP13□□□□□ -0.33
LSM5-201ENST00000223084 DHX35Q9H5Z1 703 aaKnown RBP13□□□□□ -0.33
LSM5-201ENST00000223084 TMEM248Q9NWD8 314 aa13□□□□□ -0.33
LSM5-201ENST00000223084 CTTNBP2NLQ9P2B4 639 aa13□□□□□ -0.33
LSM5-201ENST00000223084 VPS51Q9UID3 782 aa13□□□□□ -0.33
LSM5-201ENST00000223084 SLC25A13Q9UJS0 675 aa13□□□□□ -0.33
LSM5-201ENST00000223084 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
LSM5-201ENST00000223084 USP18Q9UMW8 372 aa13□□□□□ -0.33
LSM5-201ENST00000223084 ACTL7AQ9Y615 435 aa13□□□□□ -0.33
LSM5-201ENST00000223084 GVINP1Q7Z2Y8 2422 aa13□□□□□ -0.33
LSM5-201ENST00000223084 CHD5Q8TDI0 1954 aa13□□□□□ -0.33
LSM5-201ENST00000223084 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
LSM5-201ENST00000223084 USP34Q70CQ2 3546 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 K7ERQ8 282 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 CBX4O00257 560 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 MAP3K13O43283 966 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 MAPKAPK2P49137 400 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 TPI1P60174 286 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 RPS14P62263 151 aaKnown RBP12.99□□□□□ -0.33
LSM5-201ENST00000223084 KRT83P78385 493 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 GNA12Q03113 381 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 BYSLQ13895 437 aaKnown RBP12.99□□□□□ -0.33
LSM5-201ENST00000223084 PIGHQ14442 188 aaPredicted RBP12.99□□□□□ -0.33
LSM5-201ENST00000223084 DLG2Q15700 870 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 CCDC6Q16204 474 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 SMTNL2Q2TAL5 461 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 ACCSLQ4AC99 568 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 KCNT1Q5JUK3 1230 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 PMS2CLQ68D20 193 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 STK40Q8N2I9 435 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 KDM1BQ8NB78 822 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 FRS2Q8WU20 508 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 CTNNBL1Q8WYA6 563 aaPredicted RBP12.99□□□□□ -0.33
LSM5-201ENST00000223084 ZC3H10Q96K80 434 aaKnown RBP12.99□□□□□ -0.33
LSM5-201ENST00000223084 EPAS1Q99814 870 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 ZWILCHQ9H900 591 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 ATP13A1Q9HD20 1204 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 OSGEPQ9NPF4 335 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 USP36Q9P275 1121 aaKnown RBP12.99□□□□□ -0.33
LSM5-201ENST00000223084 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
LSM5-201ENST00000223084 EDDM13A0A1B0GTR0 161 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms