RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 LRRC40Q9H9A6 602 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 COPS7BQ9H9Q2 264 aaPredicted RBP18.89■□□□□ 0.61
CACTIN-201ENST00000221899 UBP1Q9NZI7 540 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 PSMD13Q9UNM6 376 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 COMMD3-BMI1R4GMX3 469 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 ZCWPW2A0A1B0GU75 182 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 SMIM18P0DKX4 95 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 ENO3P13929 434 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 TKTP29401 623 aaKnown RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 PRDX6P30041 224 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 AVPR1AP37288 418 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 GRM5P41594 1212 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 MAGEA12P43365 314 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 RABGGTBP53611 331 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 FLOT2Q14254 428 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 CNGA3Q16281 694 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 OTUD1Q5VV17 481 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 STRADAQ7RTN6 431 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 CATSPER2Q96P56 530 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 UNKQ9C0B0 810 aaKnown RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 IARS2Q9NSE4 1012 aaKnown RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 C20orf96Q9NUD7 363 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 STK39Q9UEW8 545 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 APPL1Q9UKG1 709 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 FAM72CH0Y354 149 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 M0QYT0 321 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 GNL1P36915 607 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 NDUFV1P49821 464 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 POU5F1BQ06416 359 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 LSAMPQ13449 338 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 KYAT1Q16773 422 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 FAM72AQ5TYM5 149 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 FAM72DQ6L9T8 149 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 FAM72BQ86X60 149 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 IFNLR1Q8IU57 520 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 LINC01465Q8N7H1 131 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 KBTBD7Q8WVZ9 684 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 CNBD2Q96M20 576 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 ILKAPQ9H0C8 392 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-201ENST00000221899 TASP1Q9H6P5 420 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 CHRAC1Q9NRG0 131 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 AK5Q9Y6K8 562 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 SLC4A7Q9Y6M7 1214 aa18.88■□□□□ 0.61
CACTIN-201ENST00000221899 EEF2KO00418 725 aaKnown RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PHGDHO43175 533 aaKnown RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 JUNP05412 331 aaKnown RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 TCN1P20061 433 aaPredicted RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 AKAP5P24588 427 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 SLC25A52Q3SY17 297 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 SYPL2Q5VXT5 272 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 SULF1Q8IWU6 871 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 RNF217Q8TC41 542 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 LRGUKQ96M69 825 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ELP3Q9H9T3 547 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 BFARQ9NZS9 450 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 CCDC160A6NGH7 325 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 CLDN5O00501 218 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PEX1O43933 1283 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 DNAJA2O60884 412 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PIGNO95427 931 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 THRAP10827 490 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ATP6V1B1P15313 513 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PTPN3P26045 913 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ARHGAP1Q07960 439 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 MPP3Q13368 585 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 BNC2Q6ZN30 1099 aaPredicted RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PIGZQ86VD9 579 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 KCNMB4Q86W47 210 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 KYQ8NBH2 561 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 BTBD9Q96Q07 612 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 KLK14Q9P0G3 267 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PAPPA2Q9BXP8 1791 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 TMEM114B3SHH9 223 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 SPTLC1O15269 473 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PIM1P11309 404 aaPredicted RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 GRIA4P48058 902 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 MS4A2Q01362 244 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 EML3Q32P44 896 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ARL13AQ5H913 290 aaPredicted RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ARHGAP22Q7Z5H3 698 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 CLEC14AQ86T13 490 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 NT5DC4Q86YG4 428 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 PSTKQ8IV42 348 aaKnown RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 GALNT4Q8N4A0 578 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 BHLHE22Q8NFJ8 381 aaPredicted RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 SREK1Q8WXA9 508 aaKnown RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 VPS39Q96JC1 886 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 SCYL1Q96KG9 808 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 ACE2Q9BYF1 805 aaPredicted RBP18.87■□□□□ 0.61
CACTIN-201ENST00000221899 GOLGA2P5Q9HBQ8 144 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 IGSF9Q9P2J2 1179 aa18.87■□□□□ 0.61
CACTIN-201ENST00000221899 FZD9O00144 591 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 ZBTB24O43167 697 aaPredicted RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 CYP2C8P10632 490 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 ACAT1P24752 427 aaKnown RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 NAGLUP54802 743 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms