RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 SLC2A3P11169 496 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CD52P31358 61 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 MRPS6P82932 125 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CTXN3Q4LDR2 81 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 FRA10AC1Q70Z53 315 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 RBM15BQ8NDT2 890 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 EME1Q96AY2 570 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 FGD4Q96M96 766 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 NFKBIZQ9BYH8 718 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 EFCAB1Q9HAE3 211 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 SFMBT1Q9UHJ3 866 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 DSEQ9UL01 958 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 BIRC5O15392 142 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 TOP3BO95985 862 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 F7P08709 466 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CLCNKBP51801 687 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 NAB1Q13506 487 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 SETD3Q86TU7 594 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 ARFGAP1Q8N6T3 406 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 PCED1BQ96HM7 432 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 PPP1R2P1Q96PQ5 205 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 HNRNPABQ99729 332 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 VCX3AQ9NNX9 186 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 TAS2R1Q9NYW7 299 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 KCNH4Q9UQ05 1017 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 LRCH1Q9Y2L9 728 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 MLNP12872 115 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 PRKAA1Q13131 559 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CYTH1Q15438 398 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 PPP1R15BQ5SWA1 713 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 RIPOR1Q6ZS17 1223 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 ATP6V0D2Q8N8Y2 350 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 KCTD4Q8WVF5 259 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 TBL1YQ9BQ87 522 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 BUD23O43709 281 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 FKBP6O75344 327 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 SLC18A1P54219 525 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 NME5P56597 212 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 KHDC1Q4VXA5 237 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 VWA5B1Q5TIE3 1220 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 NEPROQ6NW34 567 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 BNC2Q6ZN30 1099 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 SLC41A1Q8IVJ1 513 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 CADM1Q9BY67 442 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 ANLNQ9NQW6 1124 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 RCOR3Q9P2K3 495 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TRPC5OSA6NMA1 111 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 RENBPP51606 427 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 WASHC5Q12768 1159 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 NFE2Q16621 373 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TEX44Q53QW1 395 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 OTOP3Q7RTS5 596 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 C16orf70Q9BSU1 422 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 YY1AP1Q9H869 796 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MRPL40Q9NQ50 206 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MPP6Q9NZW5 540 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TMEM216Q9P0N5 145 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 CLGNO14967 610 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 ANGPT2O15123 496 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MSI1O43347 362 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 SUPT3HO75486 399 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 LRIG2O94898 1065 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TGDSO95455 350 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 SERPINA6P08185 405 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 IRF1P10914 325 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 PROZP22891 400 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 PAX7P23759 505 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 EPHA3P29320 983 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TBX4P57082 545 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MAXP61244 160 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TWF1Q12792 350 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 NCBP2-AS2Q69YL0 99 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 CTU1Q7Z7A3 348 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 KYQ8NBH2 561 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MARK4Q96L34 752 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 USP29Q9HBJ7 922 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 ZNF358Q9NW07 568 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 MCM8Q9UJA3 840 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 CDK5RAP2Q96SN8 1893 aa12.58□□□□□ -0.4
TM9SF4-201ENST00000217315 GOLGA4Q13439 2230 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 DPYSL4O14531 572 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 OLIG2Q13516 323 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 DLG2Q15700 870 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms