RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SHCBP1LQ9BZQ2 653 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TRIM4Q9C037 500 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 ILKAPQ9H0C8 392 aaPredicted RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 GBA3Q9H227 469 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TCF7L2Q9NQB0 619 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 PIGVQ9NUD9 493 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TRHDEQ9UKU6 1024 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TBC1D30Q9Y2I9 924 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 E9PBE3 544 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 KLHL41O60662 606 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 THRAP10827 490 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 RAG1P15918 1043 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
SRP54-201ENST00000216774 ADRA1BP35368 520 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 ADCYAP1R1P41586 468 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 NPY2RP49146 381 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 GRM2Q14416 872 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 SMAD1Q15797 465 aaKnown RBP13.58□□□□□ -0.24
SRP54-201ENST00000216774 SFT2D3Q587I9 215 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 INTS6LQ5JSJ4 861 aaKnown RBP13.58□□□□□ -0.24
SRP54-201ENST00000216774 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 PIP4K2CQ8TBX8 421 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 NDRG1Q92597 394 aaKnown RBP13.58□□□□□ -0.24
SRP54-201ENST00000216774 AGAP2Q99490 1192 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
SRP54-201ENST00000216774 KATNBL1Q9H079 304 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 OXSMQ9NWU1 459 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 ANKRD6Q9Y2G4 727 aa13.58□□□□□ -0.24
SRP54-201ENST00000216774 MYO18AQ92614 2054 aaKnown RBP13.58□□□□□ -0.24
SRP54-201ENST00000216774 PDCD11Q14690 1871 aaKnown RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 SYNJ2BP-COX16A0A087WUM0 186 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 E2F8A0AVK6 867 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 H3BNX3 289 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 AP3B1O00203 1094 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 SORBS2O94875 1100 aaKnown RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 SNUPNO95149 360 aaKnown RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 C2P06681 752 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 ERCC2P18074 760 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 VCLP18206 1134 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 CYP2B6P20813 491 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 PEX2P28328 305 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 AXLP30530 894 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 GMPRP36959 345 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 POLE2P56282 527 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 CCNA1P78396 465 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 SEMA3BQ13214 749 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 NME3Q13232 169 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 MPP3Q13368 585 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 MSLNQ13421 630 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 HSP90AA5PQ58FG0 334 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 XKR4Q5GH76 650 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 TCHHL1Q5QJ38 904 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 LPCAT4Q643R3 524 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 ITPRIPL1Q6GPH6 555 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 TOP6BLQ8N6T0 577 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 GTF3C2Q8WUA4 911 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 ATXN7L3BQ96GX2 97 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 SERPINI1Q99574 410 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 IL22Q9GZX6 179 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 LRRC4Q9HBW1 653 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 ADARB2Q9NS39 739 aaKnown RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 NSMCE4AQ9NXX6 385 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 C6orf203Q9P0P8 240 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 COX16Q9P0S2 106 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 STK39Q9UEW8 545 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 RAP2CQ9Y3L5 183 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 MATN2O00339 956 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 HDAC3O15379 428 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 USP12O75317 370 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 MMP3P08254 477 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 DARSP14868 501 aaKnown RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 AKAP5P24588 427 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 CSRP3P50461 194 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 AQP4P55087 323 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 IRF9Q00978 393 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 OLIG2Q13516 323 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 TRIP10Q15642 601 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 DGKDQ16760 1214 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 SYPL2Q5VXT5 272 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 C16orf89Q6UX73 402 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 KCNMB4Q86W47 210 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 TP53INP2Q8IXH6 220 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 MAPK15Q8TD08 544 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 AGAP3Q96P47 875 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 LENG8Q96PV6 779 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 VAT1Q99536 393 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 GATA5Q9BWX5 397 aaPredicted RBP13.57□□□□□ -0.24
SRP54-201ENST00000216774 SPATA16Q9BXB7 569 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 MAN1C1Q9NR34 630 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 TSC2P49815 1807 aa13.57□□□□□ -0.24
SRP54-201ENST00000216774 NRCAMQ92823 1304 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms