RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PCDH12Q9NPG4 1184 aa13.84□□□□□ -0.19
TGFBR3-201ENST00000212355 TBC1D13Q9NVG8 400 aa13.84□□□□□ -0.19
TGFBR3-201ENST00000212355 CD163L1Q9NR16 1453 aa13.83□□□□□ -0.19
TGFBR3-201ENST00000212355 TRIM24O15164 1050 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 LBPP18428 481 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 RAB14P61106 215 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CDH17Q12864 832 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 EPS8Q12929 822 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 MAMLD1Q13495 774 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CCNIQ14094 377 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 TOMM20Q15388 145 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SLC15A2Q16348 729 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 MIIPQ5JXC2 388 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ARMC4Q5T2S8 1044 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 TMPRSS6Q8IU80 811 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ITFG1Q8TB96 612 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 RMND5BQ96G75 393 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 COQ7Q99807 217 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF624Q9P2J8 865 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 EGFL7Q9UHF1 273 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 COPG1Q9Y678 874 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 PNMA8CA0A1B0GUJ8 204 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 RPL7AP62424 266 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 MACC1Q6ZN28 852 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 AMIGO2Q86SJ2 522 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CYP4Z1Q86W10 505 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 HERC6Q8IVU3 1022 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 KIAA0319LQ8IZA0 1049 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 C3orf20Q8ND61 904 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 FAR2Q96K12 515 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SLC4A5Q9BY07 1137 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CCDC166P0CW27 439 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 GRK3P35626 688 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 GP5P40197 560 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 POLD2P49005 469 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 NRG1Q02297 640 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CTBP1Q13363 440 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ZC3H7AQ8IWR0 971 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 KCTD4Q8WVF5 259 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ADGRA3Q8IWK6 1321 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 RECQL4O94761 1208 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 TTC7BQ86TV6 843 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ETNPPLQ8TBG4 499 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 B4GALT5O43286 388 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 TRIM13O60858 407 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 LSM8O95777 96 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SLC6A3Q01959 620 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SPANXN3Q5MJ09 141 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 ANKS6Q68DC2 871 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 PPP2R3CQ969Q6 453 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 WDR18Q9BV38 432 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SERHL2Q9H4I8 314 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 SERHLQ9NQF3 203 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 C15orf41Q9Y2V0 281 aa13.83□□□□□ -0.2
TGFBR3-201ENST00000212355 PSMG1O95456 288 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 EIF2S1P05198 315 aaKnown RBP13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 GOT1P17174 413 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 SCNN1GP51170 649 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 CNGA2Q16280 664 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 FNDC3BQ53EP0 1204 aaKnown RBP13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 CACTIN-AS1Q8N1I8 211 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 AGBL3Q8NEM8 1001 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 TADA1Q96BN2 335 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 MBOAT7Q96N66 472 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 AVENQ9NQS1 362 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 LNPEPQ9UIQ6 1025 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 CNTNAP4Q9C0A0 1308 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 EPORP19235 508 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 ATP6V1C1P21283 382 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 UGCGQ16739 394 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 ALKBH2Q6NS38 261 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 UNC5AQ6ZN44 842 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 TLK2Q86UE8 772 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 LGMNQ99538 433 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 OGDHLQ9ULD0 1010 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 PLA2G4EQ3MJ16 856 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 CCDC153Q494R4 210 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 DENND1CQ8IV53 801 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 DPP10Q8N608 796 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 DPF3Q92784 378 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNHIT2Q9UHR6 403 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 FBXO10Q9UK96 956 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 MROH7Q68CQ1 1323 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 BFSP2Q13515 415 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 OR52K2Q8NGK3 314 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 ASTN1O14525 1302 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms