RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 P3h1Q3V1T4 739 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Arhgap1Q5FWK3 439 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Ksr1Q61097 873 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Mef2dQ63943 514 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Gpr156Q6PCP7 798 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Rps6ka6Q7TPS0 764 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 March4Q80TE3 409 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Usp1Q8BJQ2 784 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Ctxn3Q8BXZ0 80 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 PygbQ8CI94 843 aaKnown RBP14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Slc51aQ8R000 340 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Fbxo21Q8VDH1 627 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Slc14a1Q8VHL0 384 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Kifc1Q9QWT9 674 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 4930544D05RikJ3QK56 214 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 CartptP56388 129 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Btnl1Q7TST0 509 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 4932414N04RikQ8CEQ9 752 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Olfr1353Q8VGU8 309 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Tubgcp4Q9D4F8 667 aa14.09□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Gm21293E9Q4G9 266 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 XntrpcF8VQM8 1264 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Calhm3J3QMI4 347 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Rbp1Q00915 135 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Tbc1d12Q6A039 696 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Atp11bQ6DFW5 1175 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Gtf2a2Q80ZM7 109 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Tubgcp5Q8BKN5 1024 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Spon2Q8BMS2 330 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Swi5Q8K3D3 89 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Tmco1Q921L3 188 aaKnown RBP14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Trmt10bQ9D075 318 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 NvlQ9DBY8 855 aaKnown RBP14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Trpc2Q9R244 1172 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Ap4s1Q9WVL1 144 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Dctn3Q9Z0Y1 186 aa14.08□□□□□ -0.15
Pcdha1-202ENSMUST00000193839 Sec14l1A8Y5H7 715 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gm6205E9PZS2 359 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gm10639E9Q6L7 222 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gsta2P10648 222 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Lsp1P19973 330 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 CremP27699 357 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Pdss1Q33DR2 409 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Arhgap26Q6ZQ82 814 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gm6367Q8C6L9 287 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 KyQ8C8H8 661 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Cnot3Q8K0V4 751 aaKnown RBP14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Hacd3Q8K2C9 362 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Tfap2dQ91ZK0 452 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Sugt1Q9CX34 336 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Acbd6Q9D061 282 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Ripk3Q9QZL0 486 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Krt6bQ9Z331 562 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Smok3aC0HKC8 504 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Smok3bC0HKC9 504 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Vmn2r27D3YUK6 857 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Dpysl4O35098 572 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Slc27a2O35488 620 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Krt6aP50446 553 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Tbx1P70323 479 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Pou2f2Q00196 463 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Pik3r5Q5SW28 871 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 E2f5Q61502 335 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 CapslQ6P8Y1 208 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Cdc14bQ6PFY9 485 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mfsd14bQ8CIA9 507 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Atp5oQ9DB20 213 aaKnown RBP14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Cyp2b13A6H6J2 491 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Ptp4a2O70274 167 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 PrkcdP28867 674 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Epas1P97481 874 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Six2Q62232 296 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Trmt13Q8BYH3 481 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Sugp1Q8CH02 643 aaKnown RBP14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Ttc39cQ8VE09 580 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mfsd5Q921Y4 450 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 CmasQ99KK2 432 aaKnown RBP14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Tmem79Q9D709 391 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Acsl4Q9QUJ7 711 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Map3k6Q9WTR2 1291 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Rpl9-ps1S4R1R7 191 aa14.08□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Gm6133B2RY53 190 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 R3hdm1E9Q9Q2 1135 aaKnown RBP14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Alkbh5Q3TSG4 395 aaKnown RBP14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Olfr867Q7TRF3 331 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Nox1Q8CIZ9 591 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mtrf1Q8K126 446 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mrpl58Q8R035 206 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Pcdha1Q91Y21 948 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Ubxn6Q99PL6 442 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mta2Q9R190 668 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Oas1eA0A0J9YV76 386 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Znf711A2ANX9 761 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 NuggcD3YWJ0 796 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 D3Z070 196 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Vmn2r15L7N2A0 855 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 PuraP42669 321 aaKnown RBP14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Mc4rP56450 332 aa14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Tars2Q3UQ84 723 aaKnown RBP14.07□□□□□ -0.16
Pcdha1-202ENSMUST00000193839 Rbm44Q3V089 1013 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms