RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Snx15Q91WE1 337 aa28.4■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Rfc5Q9D0F6 339 aa28.4■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Il20Q9JKV9 176 aa28.4■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Fbxo17Q9QZM8 286 aa28.4■■■□□ 2.14
Ldb1-208ENSMUST00000185355 4930402K13RikB1AW18 415 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 4930558K02RikE0CXC6 182 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Ccna2P51943 422 aaKnown RBP28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Smad1P70340 465 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 PrkczQ02956 592 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Lsmem1Q3UQS2 128 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Slc22a16Q497L8 649 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Usp17laQ61068 526 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Abcd2Q61285 741 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Dnajc1Q61712 552 aaKnown RBP28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 NcaphQ8C156 731 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Zcchc14Q8VIG0 956 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 ChiaQ91XA9 473 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Erap1Q9EQH2 930 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Cacng3Q9JJV5 315 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Cyth1Q9QX11 398 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 ClcnkbQ9WUB6 687 aa28.39■■■□□ 2.14
Ldb1-208ENSMUST00000185355 Akap5D3YVF0 745 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 P01641 117 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Rpl10aP53026 217 aaKnown RBP28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 YwhahP68510 246 aaKnown RBP28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Kcnc2Q14B80 642 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Ric8bQ80XE1 520 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Kank2Q8BX02 843 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Kcnc4Q8R1C0 628 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Pde6cQ91ZQ1 861 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Q922M7 232 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Fuca2Q99KR8 461 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Rex1bdQ9CYZ6 169 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Q9D979 236 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Gucy1a3Q9ERL9 691 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Wfdc1Q9ESH5 211 aa28.39■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Vmn2r70K7N702 854 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 ChrngP04760 519 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Klf1P46099 358 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Trcg1Q58Y74 825 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Afap1l2Q5DTU0 825 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Tas2r129Q7M709 320 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Far2Q7TNT2 515 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Arhgef26D3YYY8 869 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 BpgmP15327 259 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Lrrn4P59383 733 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Samd11Q1RNF8 542 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Mettl17Q3U2U7 461 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Cldn11Q60771 207 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Cyp2c29Q64458 490 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 DgkqQ6P5E8 934 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Tfb1mQ8JZM0 345 aaKnown RBP28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Pcdhb11Q91UZ8 797 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Mrps2Q924T2 291 aaKnown RBP28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Clstn3Q99JH7 956 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 PompQ9CQT5 141 aa28.38■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Osbpl8B9EJ86 889 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 2610008E11RikG3X964 669 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Calhm3J3QMI4 347 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Vmn2r67K7N6T2 851 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Itga4Q00651 1039 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Snx21Q3UR97 363 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Grm6Q5NCH9 871 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Ccdc85aQ5SP85 500 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 PigaQ64323 485 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 ProcrQ64695 242 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Paqr6Q6TCG5 343 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 DstykQ6XUX1 927 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Slc16a9Q7TM99 508 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Tle6Q9WVB3 581 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Gm45861A0A1B0GRY3 1923 aa28.37■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Mkrn2osD3Z393 217 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Pcsk6F6XJP7 959 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Fgf10O35565 209 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 CrymO54983 313 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Ythdf1P59326 559 aaKnown RBP28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Deup1Q7M6Y5 601 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 SowahcQ8C0J6 512 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Rps6kl1Q8R2S1 544 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Tekt2Q922G7 430 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 DtnaQ9D2N4 746 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Agpat3Q9D517 376 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Oser1Q9D722 291 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Q9D9D9 101 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Igkv5-45A0A0B4J1J1 115 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Zc3h7aE9PWW6 970 aaKnown RBP28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Raph1F2Z3U3 1266 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Akain1G3UWD5 69 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 H2-Eb1P04230 264 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 SagP20443 403 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Aldh2P47738 519 aaKnown RBP28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 PrkcqQ02111 707 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Cdk7Q03147 346 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Sdr16c6Q05A13 316 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Chi3l1Q61362 389 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Zfp398Q8BV16 643 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Ndufaf7Q9CWG8 436 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 CabyrQ9D424 453 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Stk11Q9WTK7 436 aa28.36■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Olfr1160A2AVT0 319 aa28.35■■■□□ 2.13
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms