RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Map3k6Q9WTR2 1291 aa13.73□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Bclaf3A2AG58 752 aaKnown RBP13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 4931406B18RikA2RSL7 367 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ccdc144bE9PVZ3 520 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cdr1E9Q0B4 517 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Zfp94E9Q6Y4 486 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm5689F6Y2A6 97 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Kbtbd2G3X9X1 623 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 ChkaO54804 453 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 CidebO70303 219 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mup5P11591 180 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Serpina5P70458 405 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Thumpd3P97770 505 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Alkbh5Q3TSG4 395 aaKnown RBP13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cage1Q5IR70 849 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mea1Q64327 174 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ptk6Q64434 451 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tyw3Q8BSA9 257 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Abi1Q8CBW3 481 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Dync1li1Q8R1Q8 523 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc35f5Q8R314 524 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tas1r2Q925I4 843 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Atad1Q9D5T0 361 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Sgf29Q9DA08 293 aaKnown RBP13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cyp4v2Q9DBW0 525 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Hes6Q9JHE6 224 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Serpinb3cA2RSF9 386 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm5483B2RV77 97 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 HalP35492 657 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 OtulinQ3UCV8 352 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rxfp1Q6R6I7 758 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Zfp62Q8C827 914 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Stx18Q8VDS8 334 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Noxred1Q9D3S5 366 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 SgshQ9EQ08 502 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc12a4Q9JIS8 1085 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Capn7Q9R1S8 813 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Vmn2r25W4VSP2 855 aa13.72□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Calhm3J3QMI4 347 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Atxn1lP0C7T6 687 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc11a2P49282 568 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Usp46P62069 366 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Olfm3P63056 478 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Bpifa6Q0VGU8 367 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 FsbpQ8BKE5 299 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 NaprtQ8CC86 538 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Pip4k2cQ91XU3 421 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 AslQ91YI0 464 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 CoprsQ9CQ13 173 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Thg1lQ9CY52 298 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Dlgap1Q9D415 992 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rmi1Q9D4G9 616 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Fam122aQ9DB52 284 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Syde1Q9DBZ9 737 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 GmprQ9DCZ1 345 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tk2Q9R088 270 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Galk1Q9R0N0 392 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 DldO08749 509 aaKnown RBP13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Hes2O54792 157 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cdh16O88338 830 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc6a13P31649 602 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 S100bP50114 92 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mef2dQ63943 514 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ccdc154Q6RUT8 657 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ip6k2Q80V72 448 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Best2Q8BGM5 508 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc17a6Q8BLE7 582 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Clec4gQ8BNX1 294 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 DrgxQ8BYH0 263 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Glis1Q8K1M4 789 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ube2q2Q8K2Z8 378 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc36a1Q8K4D3 475 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ugt2b1Q8R084 529 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Alg9Q8VDI9 611 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rem2Q8VEL9 341 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Pcdha1Q91Y21 948 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Actrt1Q9D9J3 376 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Dusp6Q9DBB1 381 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 ParvbQ9ES46 365 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 HnrnpcQ9Z204 313 aaKnown RBP13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc8a3S4R2P9 928 aa13.71□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Atg2aQ6P4T0 1914 aa13.71□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Gm29554A0A087WNW4 188 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Usp51B1AY15 661 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Abhd12bG3UZN6 359 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Cyp2j6O54750 501 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Fen1P39749 378 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pyroxd1Q3TMV7 498 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 TceancQ3US16 359 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 GstcdQ5RL51 634 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 RadilQ69Z89 1099 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Arhgap20Q6IFT4 1182 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Olfr412Q7TRW7 312 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Tmem202Q80W35 275 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 1700001K19RikQ80ZT1 219 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Znf473Q8BI67 892 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Fra10ac1Q8BP78 315 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 CntrobQ8CB62 887 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Hmgcll1Q8JZS7 343 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pcdhb17Q91VD8 799 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms