RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Trmt1lA2RSY6 728 aaKnown RBP18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tmem17Q8K0U3 198 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Sult1b1Q9QWG7 299 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm17175E9Q528 179 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 H2-Eb1P04230 264 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Znf335A2A5K6 1337 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pdcd5P56812 126 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Adad1Q5SUE7 619 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Herc3A6H6S0 1050 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Arfip1G5E8V9 373 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm6351K9J7D1 481 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pgam2O70250 253 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 NamptQ99KQ4 491 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Disp3A3KFU9 1347 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Flt4P35917 1363 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Sema4dO09126 861 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pald1P70261 859 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cnot7Q60809 285 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ugt2a1Q80X89 528 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fstl5Q8BFR2 847 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Dcdc2cQ9D1B8 347 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Snap29Q9ERB0 260 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 RaraP11416 462 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 HnrnpabQ99020 285 aaKnown RBP18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ddx50Q99MJ9 734 aaKnown RBP18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rgs17Q9QZB0 210 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Kcnt2D3Z649 1135 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Stox2Q499E5 926 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Inpp4bQ6P1Y8 924 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rprd1aQ8VDS4 312 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ccdc120A2AEV7 629 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Atf6F6VAN0 656 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Kctd8Q50H33 476 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Zfp512bQ6PHP4 879 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Wdr37Q8CBE3 496 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Zbtb44Q8R0A2 453 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cdk7Q03147 346 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Clca4aQ6Q473 924 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Llgl1Q80Y17 1036 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Znf436Q8BPP0 452 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ssh3Q8K330 649 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ndufaf6A2AIL4 333 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ttc23lA6H6E9 458 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 LtfP08071 707 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Prdm4Q80V63 803 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 FggQ8VCM7 436 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pbdc1Q9D0B6 198 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nr3c1P06537 783 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nos2P29477 1144 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tmem184cQ3TPR7 525 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Foxn1Q61575 648 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Akr1e2Q9DCT1 301 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 PpieQ9QZH3 301 aaKnown RBP18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Usp31E9Q6Y8 1344 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Spin2-ps6A0A140T8V2 174 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rbp3P49194 1234 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Abi2P62484 446 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Grm1P97772 1199 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 CluQ06890 448 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Srbd1Q497V5 1015 aaKnown RBP18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nudt16Q6P3D0 195 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mbtd1Q6P5G3 631 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pcdhb16Q91Y03 802 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Dcun1d5Q9CXV9 237 aa18.66■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rpl9-ps6A0A140T8T4 192 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Usp53P15975 1069 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rpl9P51410 192 aaKnown RBP18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pqlc1Q80XM9 271 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Crls1Q80ZM8 303 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Prl7b1Q8CGZ9 251 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cyp2c70Q91W64 489 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 UqcrbQ9D855 111 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Eya4Q9Z191 616 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cdk5rap2Q8K389 1822 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Unc5cO08747 931 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cog2Q921L5 731 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tex16F6WNY1 1150 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Alg10bQ3UGP8 474 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ints10Q8K2A7 710 aaKnown RBP18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rsph14Q9D3W1 341 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Apc2Q9Z1K7 2274 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Igsf1Q7TQA1 1317 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Aldh3b3J3QMK6 479 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fgfr4Q03142 799 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Snx27Q3UHD6 539 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Efcab6Q6P1E8 1516 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Lgr4A2ARI4 951 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rpl3P27659 403 aaKnown RBP18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Lrrc27Q80YS5 523 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Spag1Q80ZX8 901 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pdpk1Q9Z2A0 559 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nos1Q9Z0J4 1429 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Col28a1Q2UY11 1141 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rab26Q504M8 260 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cox15Q8BJ03 413 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Polr3hQ9D2C6 204 aaKnown RBP18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Olfr414E9Q5P8 317 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Atp1b3P97370 278 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm12258Q5NC63 627 aa18.65■□□□□ 0.58
Trim71-201ENSMUST00000111816 Scaf4Q6PFF0 1209 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms