RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Chn2Q80XD1 332 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 1700001K19RikQ80ZT1 219 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Npas4Q8BGD7 802 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Dmtf1Q8CE22 761 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ero1aQ8R180 464 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pgam1Q9DBJ1 254 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pcna-ps2A0A140T8V5 261 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 1700024B05RikE9Q6D7 167 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ptger1P35375 405 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 CiitaP79621 1155 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Trim43cP86449 446 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Psmb4P99026 264 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Slc17a7Q3TXX4 560 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gm1587Q3UT80 123 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Dsg1bQ7TSF1 1060 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tnfaip8l2Q9D8Y7 184 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tmem115Q9WUH1 350 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Irs2P81122 1321 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Vmn1r39G3UWE6 305 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cog7Q3UM29 770 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Map3k10Q66L42 940 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Glra3Q91XP5 464 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 March2Q99M02 246 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pard3bQ9CSB4 1203 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Terb2Q9D494 218 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ddx21Q9JIK5 851 aaKnown RBP13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Htra2Q9JIY5 458 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Oas1eA0A0J9YV76 386 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tcp10cE9Q046 482 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cacna2d1O08532 1103 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Serpina6Q06770 397 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Fbxw10Q5SUS0 1030 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Fcrl5Q68SN8 596 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Nrg1Q6DR99 700 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Vwa2Q70UZ7 791 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Smoc1Q8BLY1 463 aaKnown RBP13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Hdac7Q8C2B3 938 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Acad10Q8K370 1069 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Map3k21Q8VDG6 1002 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Setd7Q8VHL1 366 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Lpin1Q91ZP3 924 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Homer3Q99JP6 356 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Msgn1Q9JK54 188 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Stk11Q9WTK7 436 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gm45713A0A1B0GS68 446 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tmem45a2B7ZWJ5 289 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Zfp882E9Q4R4 555 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Dusp8O09112 663 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ctnnb1Q02248 781 aaKnown RBP13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cpne7Q0VE82 557 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 B3gntl1Q3U129 357 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 E330034G19RikQ3UWX6 351 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 GpamQ61586 827 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ccdc50Q810U5 305 aaKnown RBP13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 GnsQ8BFR4 544 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Metap1Q8BP48 386 aaKnown RBP13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Fam126bQ8C729 530 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Scara3Q8C850 606 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rmnd1Q8CI78 450 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pcdhb13Q91Y06 796 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ppp1r16aQ923M0 524 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Arih2Q9Z1K6 492 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rpl9-ps1S4R1R7 191 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gm28043E0CXC2 719 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Zfp846G3X996 541 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 PcnaP17918 261 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Nat9Q3UG98 241 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Nt5dc3Q3UHB1 546 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Sdf4Q61112 361 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tbc1d12Q6A039 696 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Phtf2Q8CB19 747 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 LipmQ8K2A6 422 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cgref1Q8R1U2 281 aa13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 NgrnQ99KS2 293 aaKnown RBP13.63□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Sh2d4bA6X942 431 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Smok3aC0HKC8 504 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Smok3bC0HKC9 504 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 F6Y6L6 278 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gm3336J3QMQ6 198 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gabrr2P56476 465 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Atp6v1b2P62814 511 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cdk16Q04735 496 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Akr1clQ3UXL1 322 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 MelkQ61846 643 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Smg5Q6ZPY2 1017 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pcmtd2Q8BHD8 359 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 SybuQ8BHS8 665 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ccdc40Q8BI79 1192 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Kctd12bQ8C7J6 292 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Fbxo33Q8VE08 562 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ankrd54Q91WK7 299 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Grk2Q99MK8 689 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Duoxa2Q9D311 320 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ing2Q9ESK4 281 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Col22a1E9Q7P1 1613 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gbp6A0A0G2JDV3 611 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gm3002E9PW72 216 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cyp2j12G3UXT0 502 aa13.62□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Resp18P47939 175 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 107.3 ms