RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Mtif2Q91YJ5 727 aaKnown RBP10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Hes6Q9JHE6 224 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Trpm5Q9JJH7 1158 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Mpp6Q9JLB0 553 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Gm6408J3QNG1 320 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Csf1rP09581 977 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Kcnj6P48542 425 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Pdss1Q33DR2 409 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Rapgefl1Q68EF8 662 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Q8BGC1 442 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Adgrg1Q8K209 687 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Pcdhga4Q91XY4 930 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Tlr9Q9EQU3 1032 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Gyg1Q9R062 333 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Creb3l1Q9Z125 519 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Mad2l1Q9Z1B5 205 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 LbpQ61805 481 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Lrrc75bQ7TPD7 306 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Mup21Q80YX8 181 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Luzp2Q8BGY3 345 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Fam20bQ8VCS3 409 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Itfg1Q99KW9 610 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Efhc1Q9D9T8 648 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Prkar1aQ9DBC7 381 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Fam205a1D3YZF6 1314 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Sptlc1O35704 473 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Tnfaip1O70479 316 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Emilin3P59900 758 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Plcl1Q3USB7 1096 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Zdhhc20Q5Y5T1 380 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Cdc14bQ6PFY9 485 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Plppr4Q7TME0 766 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Ldoc1Q7TPY9 151 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Atp6v1c1Q9Z1G3 382 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Uchl4P58321 233 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 PamP97467 979 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Glt6d1Q2NKH9 311 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 HnrnpdQ60668 355 aaKnown RBP10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Nrde2Q80XC6 1172 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Prkag3Q8BGM7 489 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 BroxQ8K2Q7 411 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Rbm47Q91WT8 590 aaKnown RBP10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Syde1Q9DBZ9 737 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 AdslP54822 484 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Zbtb14Q08376 449 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Lgr6Q3UVD5 967 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Mxra8Q9DBV4 442 aa10.62□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Gm15448F6PZL4 682 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Rdh7O88451 316 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Igf2bp1O88477 577 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Gria1P23818 907 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Snai1Q02085 264 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Fbxo38Q8BMI0 1194 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Oxnad1Q8VE38 311 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Ssxb9A2BI93 185 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Bbip1J3QMK2 67 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Gna13P27601 377 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Ptpn5P54830 541 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Atg4cQ811C2 458 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Tcaf1Q8BNE1 924 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Acvr1cQ8K348 493 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Mmtag2Q99LX5 260 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Snrpb2Q9CQI7 225 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Kif12Q9D2Z8 642 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Rdh14Q9ERI6 334 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Mfsd4b4J3QNS5 503 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Il4i1O09046 630 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Spata5Q3UMC0 893 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 P3h1Q3V1T4 739 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Dsg1bQ7TSF1 1060 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Thap3Q8BJ25 218 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Atp6v1hQ8BVE3 483 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Atxn7Q8R4I1 867 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Pcdhgb5Q91XX5 926 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Acot1O55137 419 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 AprtP08030 180 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Larp7Q05CL8 570 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Trappc9Q3U0M1 1148 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Dlg1Q811D0 905 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Il33Q8BVZ5 266 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Tnfaip8l2Q9D8Y7 184 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Clcn5Q9WVD4 746 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Ephb2P54763 986 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Prickle1Q3U5C7 832 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Acad9Q8JZN5 625 aaKnown RBP10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Cep97Q9CZ62 856 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 DmgdhQ9DBT9 869 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Gm7086A0A1W2P766 342 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Lcn5A2AJB7 192 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Scgb2b19J3QM75 112 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Phkg1P07934 388 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 LcorlQ3U285 600 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Fam129aQ3UW53 926 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Znf821Q6PD05 413 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 AY358078Q6UY53 465 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Arhgap12Q8C0D4 838 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 LnpepQ8C129 1025 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Carm1Q9WVG6 608 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Trip6Q9Z1Y4 480 aa10.61□□□□□ -0.71
Scn8a-201ENSMUST00000082209 Prrg1A2BFE8 218 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms