RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ephb3P54754 993 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Echdc2Q3TLP5 296 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3558Q5FWC9 205 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Krt31Q61765 416 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sorbs1Q62417 1290 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gja6Q6S5G4 283 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Elmo2Q8BHL5 732 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rccd1Q8BTU7 377 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kat5Q8CHK4 513 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pafah2Q8VDG7 390 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tti1Q91V83 1085 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fuca1Q99LJ1 452 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 2410137M14RikQ9CWF0 162 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam111aQ9D2L9 613 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dmrtc1c1Q9D410 238 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rgs17Q9QZB0 210 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prl7a2O54831 253 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mucl2P02815 138 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tspan5P62080 268 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 PhexP70669 749 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GstcdQ5RL51 634 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Podnl1Q6P3Y9 559 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prrg3Q6PAQ9 231 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmem120aQ8C1E7 343 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Vps4aQ8VEJ9 437 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Afg3l1Q920A7 789 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Snf8Q9CZ28 258 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Osbpl3Q9DBS9 855 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kcnh7Q9ER47 1195 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kif27Q7M6Z4 1394 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Olfr1084A0A1L1STZ9 313 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 2210016F16RikG3X8U3 338 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CopeO89079 308 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 RaraP11416 462 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pabpc1P29341 636 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hoxc11P31313 304 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Spag8Q3V0Q6 470 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hephl1Q3V1H3 1159 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Znf512Q69Z99 562 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nhlrc2Q8BZW8 725 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Utp4Q8R2N2 686 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpsm2Q8VDU0 679 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Brix1Q9DCA5 353 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Klhl1Q9JI74 751 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Scube2Q9JJS0 997 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 4930469K13RikA0A286YDB2 92 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nova2D3YVV7 556 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm8225D3Z536 292 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdh9F8VPK8 1237 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp607aQ3TQG9 686 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc22a16Q497L8 649 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lin54Q571G4 749 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Xkr9Q5GH62 373 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Itga3Q62470 1053 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ranbp10Q6VN19 620 aaKnown RBP9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Olfr1101Q7TR59 310 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Arhgap15Q811M1 481 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ccdc126Q8BIS8 140 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dnm1lQ8K1M6 742 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tspyl4Q8VD63 406 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Camk1gQ91VB2 477 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 ScgnQ91WD9 276 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmem138Q9D6G5 162 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 ApmapQ9D7N9 415 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 AcadsbQ9DBL1 432 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 SerhlQ9EPB5 311 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyth1Q9QX11 398 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 KdrP35918 1367 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ctnnal1O88327 731 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Il6P08505 211 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cma1P21844 247 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Foxp2P58463 714 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ccbe1Q3MI99 408 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Xlr4cQ3TKR2 215 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nlrx1Q3TL44 975 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Arhgap17Q3UIA2 846 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Eif4e1bQ3UTA9 244 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prkd1Q62101 918 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cd180Q62192 661 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Adprhl1Q8BGK2 353 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cdadc1Q8BMD5 523 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cdk5rap1Q8BTW8 588 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pde10aQ8CA95 790 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lrif1Q8CDD9 755 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ncoa5Q91W39 579 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pole4Q9CQ36 118 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpc6Q9R087 555 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 UxtQ9WTZ0 157 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Man1b1A2AJ15 658 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Olfr376E9Q4M1 320 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Aldh1a7O35945 501 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 AurkbO70126 345 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Adh1P00329 375 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nr5a1P33242 462 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpm6bP35803 328 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Drp2Q05AA6 957 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc35f3Q1LZI2 421 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pbxip1Q3TVI8 727 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 NkaplQ5SZT7 395 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpalpp1Q69ZC8 346 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms