RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 EpoP07321 192 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Krt80Q0VBK2 452 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cep295nlQ497N6 533 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm5414Q6IFZ8 552 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 DstykQ6XUX1 927 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Trnau1apQ80VC6 287 aaKnown RBP11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pdk1Q8BFP9 434 aaKnown RBP11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rtp1Q8C8C1 263 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MajinQ9D992 256 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cdh13Q9WTR5 714 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dctn3Q9Z0Y1 186 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Col22a1E9Q7P1 1613 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zbed5B2RPU8 756 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MrasO08989 208 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 PtprcP06800 1291 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kpna2P52293 529 aaKnown RBP11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Klra8Q60682 266 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Smpd4Q6ZPR5 823 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 DseQ8BLI4 958 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Upb1Q8VC97 393 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Stk19Q9JHN8 254 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm12394A2AKP6 982 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 JhyE9Q793 770 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ranbp9P69566 653 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Meaf6Q2VPQ9 191 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 ArsiQ32KI9 573 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sorbs2Q3UTJ2 1180 aaKnown RBP11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rab26Q504M8 260 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fam20cQ5MJS3 579 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rab3ipQ68EF0 428 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 LdhdQ7TNG8 484 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cog4Q8R1U1 785 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MypopQ8R4U1 393 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Klrb1fQ8VD98 217 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr1325Q8VF43 315 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 ProzQ9CQW3 399 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pou5f2Q9DAC9 329 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pi16Q9ET66 489 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cdh22Q9WTP5 813 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm10424A0A0J9YVD0 481 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ces1bD3Z5G7 567 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm2832F7AEC7 200 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Srp72F8VQC1 671 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm7971J3QMM8 481 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Prdx5P99029 210 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fam198bQ3UPI1 517 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Znf185Q62394 352 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Znf276Q8CE64 614 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Col23a1Q8K4G2 532 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gprc5bQ923Z0 410 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ggps1Q9WTN0 300 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Spin2dB1B0R2 236 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 AunipE9Q6Z5 340 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Nccrp1G3X9C2 266 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Wnt3aP27467 352 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Crhr1P35347 415 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tmprss15P97435 1069 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Wdr36Q3TAQ9 899 aaKnown RBP11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pdap1Q3UHX2 181 aaKnown RBP11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ifi47Q61635 420 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Garem2Q6PAJ3 880 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 DdnQ80TS7 710 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fzd10Q8BKG4 582 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Enpp4Q8BTJ4 456 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 OscarQ8VBT3 265 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfp64Q99KE8 643 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pgam1Q9DBJ1 254 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ddx59Q9DBN9 619 aa11.52□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ptpn1P35821 432 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ppp1r14bQ62084 147 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vgll2Q8BGW8 322 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slc41a1Q8BJA2 512 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Tgm6Q8BM11 706 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 EmsyQ8BMB0 1264 aaKnown RBP11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mtg1Q8R2R6 326 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vps39Q8R5L3 886 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 CtsrQ9JIA9 334 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 BrafP28028 804 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pcyt1aP49586 367 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lsm3P62311 102 aaKnown RBP11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 PgrQ00175 926 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gdf3Q07104 366 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Nat9Q3UG98 241 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Magee2Q52KG3 523 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slc20a1Q61609 681 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 PhgdhQ61753 533 aaKnown RBP11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Atp2c1Q80XR2 918 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Krcc1Q99JT5 256 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rassf3Q99P51 232 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lrrc46Q9DAP0 323 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Col5a2Q3U962 1497 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 D3Z070 196 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slc4a5E9Q3M5 1116 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rgs2O08849 211 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Abcb1bP06795 1276 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lta4hP24527 611 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 LdlrP35951 862 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gli1P47806 1111 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Casp7P97864 303 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 P2rx5Q3UYI1 455 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms