RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Brip1Q5SXJ3 1174 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Cdc14bQ6PFY9 485 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pcdha1Q91Y21 948 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Znf711A2ANX9 761 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Vmn2r27D3YUK6 857 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Vmn2r67K7N6T2 851 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Il12bP43432 335 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Slfn4Q3UV66 602 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Trap1Q9CQN1 706 aaKnown RBP16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ddi1Q9DAF3 408 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Qser1A2BIE1 1698 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Vti1bO88384 232 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Serpinb2P12388 415 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Irf3P70671 419 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rplp2P99027 115 aaKnown RBP16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Spink5Q148R4 1017 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Shcbp1lQ3TTP0 639 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Gpsm1Q6IR34 673 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Gpr156Q6PCP7 798 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Plbd1Q8VCI0 550 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 SerhlQ9EPB5 311 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Htra2Q9JIY5 458 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 ClockO08785 855 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Phka1P18826 1241 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Klhdc9Q3USL1 350 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Lipo3Q3UT41 399 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Adora2bQ60614 332 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Btnl1Q7TST0 509 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 RragdQ7TT45 449 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Necab2Q91ZP9 389 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Olfr1305A2AVW3 312 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Zscan5bB2RTN3 468 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Klhl33G3UW92 533 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 S100a6P14069 89 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 PrkchP23298 683 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Kcnj2P35561 428 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 BC030870Q3V2G4 71 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Slc10a5Q5PT54 434 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Atp11bQ6DFW5 1175 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Styk1Q6J9G1 429 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rfx4Q7TNK1 735 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rmdn2Q8BSE0 410 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ttc39cQ8VE09 580 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Magel2Q9QZ04 1284 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pkd2l1A2A259 760 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 EXOC1LB9EK06 172 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Myl4P09541 193 aaKnown RBP16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Frg1P97376 258 aaKnown RBP16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Cd36Q08857 472 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pyroxd1Q3TMV7 498 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Nemp1Q6ZQE4 437 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mapre2Q8R001 326 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Olfr1502Q8VG66 316 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Gm21973F6WEZ7 68 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Unc5cO08747 931 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 ZfrO88532 1074 aaKnown RBP16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 CkmP07310 381 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 FechP22315 420 aaKnown RBP16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mfsd14aP70187 490 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pou1f1Q00286 291 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Tmem247Q497K7 211 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Sema5bQ60519 1093 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Bcl2l1Q64373 233 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Hsdl1Q8BTX9 330 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Map1sQ8C052 973 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Fam126bQ8C729 530 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 CherpQ8CGZ0 936 aaKnown RBP16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Fbxo21Q8VDH1 627 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rmnd5bQ91YQ7 393 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 GabrqQ9JLF1 638 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Vnn3Q9QZ25 500 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Kif1aP33173 1695 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 UncxO08934 530 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 IppP28575 584 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Znf821Q6PD05 413 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Myl12aQ6ZWQ9 172 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pwp1Q99LL5 501 aaKnown RBP16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Gpn3Q9D3W4 284 aa16.86■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Prl6a1O35257 230 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Stra6O70491 670 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ctbp1O88712 441 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Capza2P47754 286 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pcbp1P60335 356 aaKnown RBP16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Tmprss15P97435 1069 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Sfmbt2Q5DTW2 938 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Gstt2Q61133 244 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Dnajc14Q921R4 703 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Nmd3Q99L48 503 aaKnown RBP16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 NumbQ9QZS3 653 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Scgb2b12S4R2L0 112 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Col16a1Q8BLX7 1580 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Xlr5bA2BI50 236 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Cxcr3O88410 367 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Sox6P40645 827 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mc4rP56450 332 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Cdh6P97326 790 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Psmb4P99026 264 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Cab39Q06138 341 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ubtfl1Q3USZ2 394 aa16.85■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Itga7Q61738 1179 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms