RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gria4Q9Z2W8 902 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pde4dipQ80YT7 2224 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Kiaa1522A2A7S8 1013 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ddi2A2ADY9 399 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zyg11aA2BFL2 627 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 InaP46660 501 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gas1Q01721 343 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm4951Q3UED7 406 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zdhhc18Q5Y5T2 380 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mtnr1aQ61184 353 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slc39a14Q75N73 489 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pgrmc2Q80UU9 217 aaKnown RBP10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mrpl11Q9CQF0 192 aaKnown RBP10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slc26a4Q9R155 780 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tle6Q9WVB3 581 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slfn2Q9Z0I6 378 aa10.87□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gon4lQ9DB00 2260 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f16A0A087WSN2 498 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Olfr391-psA0A0U1RNJ4 312 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Vmn1r3A2AMT7 306 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Phf11cB4XVP9 339 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Atn1O35126 1175 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 MycP01108 439 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 PrkchP23298 683 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Serpind1P49182 478 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 ZufspQ3T9Z9 577 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Fam91a1Q3UVG3 837 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ubash3bQ8BGG7 638 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slc41a1Q8BJA2 512 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tmem260Q8BMD6 703 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Taf2Q8C176 1104 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Vmn1r79Q8R285 306 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ciapin1Q8WTY4 309 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pcdhb18Q91Y02 792 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tubgcp4Q9D4F8 667 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Usp12Q9D9M2 370 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Prl2b1Q9DAZ2 228 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Paqr5Q9DCU0 330 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tsga8Q9JJL0 238 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Kcnq2Q9Z351 759 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm6811E9Q3Y8 510 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Acot1O55137 419 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Il13ra2O88786 383 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Stam2O88811 523 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 BrafP28028 804 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 HpcaP84075 193 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pou1f1Q00286 291 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Hp1bp3Q3TEA8 554 aaKnown RBP10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 B3gntl1Q3U129 357 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 D13Ertd608eQ3UPR8 151 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nell2Q61220 819 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Scube3Q66PY1 993 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Frmd5Q6P5H6 517 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Amigo2Q80ZD9 519 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Atp6v1g3Q8BMC1 118 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zbtb8bQ8CII0 484 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Stx5Q8K1E0 355 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ssxb1Q9CPU1 170 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm4985A2ALC6 410 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Krt83E9Q1Y9 479 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm10639E9Q6L7 222 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Usp17lbE9Q9U0 468 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Klhl33G3UW92 533 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ifi206G3UZV2 921 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Atxn2O70305 1285 aaKnown RBP10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gsta2P10648 222 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mpp1P70290 466 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rab26Q504M8 260 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Fam120bQ6RI63 786 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ece2Q80Z60 881 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pak5Q8C015 719 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 LnpepQ8C129 1025 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Snx8Q8CFD4 459 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mtss1Q8R1S4 759 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 NclnQ8VCM8 563 aaKnown RBP10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 PolhQ9JJN0 694 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 TfebQ9R210 475 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Trpv2Q9WTR1 756 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 TfgQ9Z1A1 397 aa10.86□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f15A0A087WR44 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f12A0A0A0MQP3 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 4921501E09RikA0A0R4J054 908 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Vmn1r2A2AMT6 306 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f9A2BFZ7 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f7A2BHG6 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f19A2CG71 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f10A2CG92 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f3A2CGC2 496 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slfn9B1ARD6 910 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f13B8JKF6 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pdia2D3Z6P0 527 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zfp788E9Q980 884 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm21973F6WEZ7 68 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f2J3QMS5 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f25J3QMV9 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f6J3QMW9 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm7694J3QNH8 270 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f26J3QNK2 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f24J3QNQ5 498 aa10.85□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Btbd35f8J3QQ50 498 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms