RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 PfkmP47857 780 aaKnown RBP16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 PigaQ64323 485 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 HpdlQ8K248 371 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 CarfQ8VHI4 689 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Snx15Q91WE1 337 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 ProzQ9CQW3 399 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tnni1Q9WUZ5 187 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Atad5Q4QY64 1826 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Wfdc16A2A5H4 111 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ccna2P51943 422 aaKnown RBP16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Lhx5P61375 402 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 CiitaP79621 1155 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Oas1fQ14AZ4 364 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nqo1Q64669 274 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfr299Q7TS05 330 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Armc12Q80X86 340 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Morc4Q8BMD7 928 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Castor2Q8CAB8 329 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 CherpQ8CGZ0 936 aaKnown RBP16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Krcc1Q99JT5 256 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Abcg3Q99P81 650 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Actrt2Q9D9L5 377 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 RecqlQ9Z129 648 aa16.52■□□□□ 0.24
Trim28-201ENSMUST00000005705 Dicer1Q8R418 1916 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Lrrc23O35125 340 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Abce1P61222 599 aaKnown RBP16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 P3h1Q3V1T4 739 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Otol1Q4ZJM7 482 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fastkd1Q6DI86 829 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gemin4Q6P6L6 1058 aaKnown RBP16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Lca5lQ8C0X0 741 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Snx8Q8CFD4 459 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ddx1Q91VR5 740 aaKnown RBP16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Frmd4bQ920B0 1035 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 MrrfQ9D6S7 262 aaKnown RBP16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mmp19Q9JHI0 527 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ppp2r3cQ9JK24 453 aa16.52■□□□□ 0.23
Trim28-201ENSMUST00000005705 Galntl6E5D8G1 601 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Zscan4bE9Q3G0 505 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Svs3aF2Z472 265 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Wnt3aP27467 352 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Msr1P30204 458 aaKnown RBP16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ccr5P51682 354 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fermt1P59113 677 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 ItkQ03526 625 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Eps8Q08509 821 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Proser1Q5PRE5 913 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gata6Q61169 589 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Itga3Q62470 1053 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cpa4Q6P8K8 420 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rpl10Q6ZWV3 214 aaKnown RBP16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Olfr1105Q7TR58 312 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Kirrel2Q7TSU7 700 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fads6Q80UG1 342 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 EmsyQ8BMB0 1264 aaKnown RBP16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Grik4Q8BMF5 956 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Bhlhe22Q8C6A8 355 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 ClyblQ8R4N0 338 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mul1Q8VCM5 352 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pcdhb10Q91VE5 797 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Nipsnap3bQ9CQE1 247 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ankrd34aB2RW11 495 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cyp2f2P33267 491 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 OsbpQ3B7Z2 805 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fam129aQ3UW53 926 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sort1Q6PHU5 825 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Arhgap25Q8BYW1 648 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 P2yr13Q9D8I2 337 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 S1pr4Q9Z0L1 386 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm281D3Z1Y0 860 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tmigd3G3X8R9 209 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 MttpO08601 894 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cdh5P55284 784 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Vps72Q62481 368 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ero1bQ8R2E9 467 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rps6kl1Q8R2S1 544 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Adcy4Q91WF3 1077 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Arhgef3Q91X46 524 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Glra3Q91XP5 464 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Nme7Q9QXL8 395 aa16.51■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sf3b1Q99NB9 1304 aaKnown RBP16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pramef17A2ASJ1 475 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Slfn9B1ARD6 910 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Usp51B1AY15 661 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm43302L7N1X8 611 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 ChrngP04760 519 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Prl3b1P09586 222 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Dnmt3cP0DOY1 709 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 AladP10518 330 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gbp10Q000W5 611 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gdf3Q07104 366 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ceacam5Q3UKK2 947 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 AcdQ5EE38 416 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 CochQ62507 552 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Zbtb5Q7TQG0 670 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Enpp4Q8BTJ4 456 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 ClmnQ8C5W0 1052 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Dedd2Q8QZV0 330 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Homer3Q99JP6 356 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tmem115Q9WUH1 350 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms