RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Bclaf3A2AG58 752 aaKnown RBP12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Vmn2r72D3Z4N8 856 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Kif6E9PX57 802 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Magea8O89012 320 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Fgl2P12804 432 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Lmnb1P14733 588 aaKnown RBP12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Wnt7bP28047 349 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Lsm3P62311 102 aaKnown RBP12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Prdx5P99029 210 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Grin2cQ01098 1239 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfr8Q60892 310 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Lrfn2Q80TG9 788 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pggt1bQ8BUY9 377 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tigd4Q8BUZ3 513 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Rsc1a1Q9ER99 582 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 B3galt4Q9Z0F0 371 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ice1E9Q286 2241 aaKnown RBP12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ighv11-2A0A075B5R8 117 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm3147A0A0J9YU88 481 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm10424A0A0J9YVD0 481 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm5751A2AHC8 147 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zbed5B2RPU8 756 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 1700064H15RikD3Z4D4 81 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 D830030K20RikE9PYQ5 218 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm7971J3QMM8 481 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm3043K7N693 218 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm16440K7N6G6 218 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm2244L7N2A3 218 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm3278L7N2D2 218 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm8271L7N2E2 218 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Hs3st1O35310 311 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Prom1O54990 867 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ptp4a2O70274 167 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cxcr2P35343 359 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 GckP52792 465 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Fmo3P97501 534 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pnpla5Q32LZ8 432 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tmem237Q3V0J1 427 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nab1Q61122 486 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Krt72Q6IME9 520 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Abhd10Q6PE15 297 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Elac2Q80Y81 831 aaKnown RBP12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 BfarQ8R079 450 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Retreg1dQ8VE91 480 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfr385Q8VGT1 312 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Dus2Q9D7B1 493 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gid8Q9D7M1 228 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Slc15a2Q9ES07 729 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zbtb18Q9WUK6 522 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Asb1Q9WV74 336 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tle6Q9WVB3 581 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm43518A0A0G2JGB6 165 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Acnat1A2AKK5 416 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ttll11A4Q9F4 727 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Erich1E9PY43 332 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Herc6F2Z461 1003 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Hk1P17710 974 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 LynP25911 512 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tgfb2P27090 414 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ptpn1P35821 432 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Hmgcs2P54869 508 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Emilin3P59900 758 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Patl1Q3TC46 770 aaKnown RBP12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Akap14Q3V0I7 536 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Slc20a1Q61609 681 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Plppr4Q7TME0 766 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 March4Q80TE3 409 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pqlc1Q80XM9 271 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Trim14Q8BVW3 440 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Plin5Q8BVZ1 463 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Map1sQ8C052 973 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zswim3Q8CFL8 695 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ttc4Q8R3H9 386 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Aff4Q9ESC8 1160 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Thap11Q9JJD0 305 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Myo18aQ9JMH9 2050 aaKnown RBP12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm36028A0A0U1RPM1 299 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm27029A2A4P4 543 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm17175E9Q528 179 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Sh3pxd2aO89032 1124 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nfe2Q07279 373 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nr2c1Q505F1 590 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 UrgcpQ5NCI0 926 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Jak2Q62120 1129 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tas2r125Q7M710 311 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Il17reQ8BH06 637 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Mtg1Q8R2R6 326 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Mul1Q8VCM5 352 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Slc35c2Q8VCX2 364 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Rnf31Q924T7 1066 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ccdc77Q9CZH8 489 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Chaf1bQ9D0N7 572 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ddx59Q9DBN9 619 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Slfn2Q9Z0I6 378 aa12.97□□□□□ -0.33
Clcn3-201ENSMUST00000004430 0610012G03RikA0A0J9YTR2 95 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Krt4P07744 525 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Dlg3P70175 849 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Frg1P97376 258 aaKnown RBP12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm4981Q3ULJ8 291 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Clhc1Q5M6W3 596 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms