RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ccna2P51943 422 aaKnown RBP16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Pecam1Q08481 727 aaKnown RBP16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Stt3bQ3TDQ1 823 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Bcar1Q61140 874 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Usp8Q80U87 1080 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Rnf168Q80XJ2 565 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 EmsyQ8BMB0 1264 aaKnown RBP16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Snx17Q8BVL3 470 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Atg14Q8CDJ3 492 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Serpina1fQ9DCQ7 411 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Tle2Q9WVB2 767 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Pcdh7A0A0A6YY83 1255 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Ttc30a2A2AKQ8 664 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Nfx1B1AY10 1114 aaKnown RBP16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfr652B9EHE6 318 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Kif6E9PX57 802 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Srbd1Q497V5 1015 aaKnown RBP16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 PkdccQ5RJI4 492 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Zpbp2Q6X786 326 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Mis18bp1Q80WQ8 998 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Slc36a3Q811P0 477 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Arhgap25Q8BYW1 648 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Eva1bQ8K2Y3 164 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Fam192aQ91WE2 254 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Pcdha6Q91Y14 946 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Pcdha1Q91Y21 948 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Pard3bQ9CSB4 1203 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Fam227bQ9D518 532 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Tmem86aQ9D8N3 241 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Coro1cQ9WUM4 474 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Gm4756A0A140LIS8 335 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Taf4E9QAP7 1042 aaKnown RBP16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 XntrpcF8VQM8 1264 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 PgrQ00175 926 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Pyroxd1Q3TMV7 498 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Znf235Q61116 645 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Ntan1Q64311 310 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Gpsm1Q6IR34 673 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Xpo1Q6P5F9 1071 aaKnown RBP16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Rxfp1Q6R6I7 758 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfr792Q7TRH9 311 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 SgczQ8BX51 311 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Galnt5Q8C102 930 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Acad10Q8K370 1069 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Unc45aQ99KD5 944 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Ndufa13Q9ERS2 144 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Rasgrp2Q9QUG9 608 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Lama3Q61789 3330 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Mup13L7N222 235 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Krt10P02535 570 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Cd3gP11942 182 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Scg3P47867 471 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Morf4l1P60762 362 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Vps45P97390 570 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 RnaselQ05921 735 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 PhgdhQ61753 533 aaKnown RBP16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Il17aQ62386 158 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Itga3Q62470 1053 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Atp2a3Q64518 1038 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Gba2Q69ZF3 918 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Utp14bQ6EJB6 756 aaKnown RBP16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Fnip2Q80TD3 1108 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Dnajc16Q80TN4 772 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Catsper3Q80W99 395 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Iars2Q8BIJ6 1012 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Wdr59Q8C0M0 992 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfr30Q8VGD8 315 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Cog2Q921L5 731 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Dok4Q99KE3 325 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 LactbQ9EP89 551 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Ing2Q9ESK4 281 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Doc2gQ9ESN1 387 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Tdp2Q9JJX7 370 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 C1qtnf1Q9QXP7 281 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Sycp3P70281 254 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Sparcl1P70663 650 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Adamts1P97857 968 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Wee2Q66JT0 555 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Prrt3Q6PE13 971 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Jade1Q6ZPI0 834 aaKnown RBP16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Akap7Q7TN79 314 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfr212Q7TS33 327 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Fam181bQ80VF6 417 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Reps2Q80XA6 521 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Afap1l1Q8BZI0 768 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Mbtps2Q8CHX6 515 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Fnbp1lQ8K012 605 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Fam114a2Q8VE88 497 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 BsndQ8VIM4 307 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Pcdhb10Q91VE5 797 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 NamptQ99KQ4 491 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Prg3Q9JL95 222 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Atp11cQ9QZW0 1129 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Angptl2Q9R045 493 aa16.74■□□□□ 0.27
Shh-201ENSMUST00000002708 Bub1O08901 1058 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Rdh7O88451 316 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Sypl2O89104 264 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 ChrngP04760 519 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfm3P63056 478 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Ptcd3Q14C51 685 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms