RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 RAG1P15918 1043 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 MX2P20592 715 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 ADCYAP1R1P41586 468 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 DEUP1Q05D60 604 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 ADIGQ0VDE8 80 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 IFRD2Q12894 506 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-233ENST00000642021 KLF10Q13118 480 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 HSP90AA5PQ58FG0 334 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 GRTP1Q5TC63 336 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 MFN1Q8IWA4 741 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 LRRC52Q8N7C0 313 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 CCDC97Q96F63 343 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-233ENST00000642021 PPP1R36Q96LQ0 422 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 NAT9Q9BTE0 207 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 CDH19Q9H159 772 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 TUT1Q9H6E5 874 aaKnown RBP14.14□□□□□ -0.15
PHGDH-233ENST00000642021 KLK14Q9P0G3 267 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 A0A096LPK6 155 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 GOLGA8QA0A0J9YX86 632 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 GOLGA8OA6NCC3 632 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 GOLGA8NF8WBI6 632 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 GOLGA8TH3BQL2 631 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 CLDN5O00501 218 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 AP1G2O75843 785 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 SERPINB6P35237 376 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 GRIA2P42262 883 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 NME3Q13232 169 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 NAB1Q13506 487 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 HFE2Q6ZVN8 426 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 KLHL4Q9C0H6 718 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 WDR55Q9H6Y2 383 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-233ENST00000642021 PLEKHA5Q9HAU0 1116 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 SF3B1O75533 1304 aaKnown RBP eCLIP14.13□□□□□ -0.153e-6■■■■■ 100.2
PHGDH-233ENST00000642021 LTBP3Q9NS15 1303 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 BPTFQ12830 3046 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 STK10O94804 968 aaKnown RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 HSPA4LO95757 839 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 CHRNGP07510 517 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 CYP2C8P10632 490 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 VCLP18206 1134 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 IGFBP6P24592 240 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 SCNN1AP37088 669 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 CDK7P50613 346 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 MTTPP55157 894 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 PDK1Q15118 436 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 TRIP10Q15642 601 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 SPANXN3Q5MJ09 141 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 CERCAMQ5T4B2 595 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 ALKAL1Q6UXT8 129 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 ACAD11Q709F0 780 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 TMEM135Q86UB9 458 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 KBTBD6Q86V97 674 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 KLHL23Q8NBE8 558 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 BEST2Q8NFU1 509 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 ZFAND2BQ8WV99 257 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 ISL2Q96A47 359 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 HSFY1Q96LI6 401 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 APOL2Q9BQE5 337 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 FAM192AQ9GZU8 254 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 PIGVQ9NUD9 493 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 IGSF9Q9P2J2 1179 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 KPNA7A9QM74 516 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 M0QYT0 321 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 SNUPNO95149 360 aaKnown RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 C2P06681 752 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 UQCRBP14927 111 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 PTPN3P26045 913 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 GSTT1P30711 240 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 SERPINB5P36952 375 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 RAB27AP51159 221 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 LIMK2P53671 638 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 GRIK4Q16099 956 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 CNPY1Q3B7I2 92 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 CCDC153Q494R4 210 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 FBXO47Q5MNV8 452 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 PPM1LQ5SGD2 360 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 ADAM32Q8TC27 787 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 GATA5Q9BWX5 397 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 ZCWPW1Q9H0M4 648 aa14.13□□□□□ -0.15
PHGDH-233ENST00000642021 FAM49AQ9H0Q0 323 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 RCOR3Q9P2K3 495 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 G3BP2Q9UN86 482 aaKnown RBP14.13□□□□□ -0.15
PHGDH-233ENST00000642021 PIRO00625 290 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 DCLK1O15075 740 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ATP9BO43861 1147 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 RECQL4O94761 1208 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 TPH1P17752 444 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SPRP35270 261 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 GARSP41250 739 aaKnown RBP14.12□□□□□ -0.15
PHGDH-233ENST00000642021 MED21Q13503 144 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 DPYSQ14117 519 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 ANKRD20A4Q4UJ75 823 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 LIN52Q52LA3 116 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 FBXL19Q6PCT2 694 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 CLEC14AQ86T13 490 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 PPTC7Q8NI37 304 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 NT5C3BQ969T7 300 aa14.12□□□□□ -0.15
PHGDH-233ENST00000642021 SPATA16Q9BXB7 569 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms