RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TLR6Q9Y2C9 796 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 HBS1LQ9Y450 684 aaKnown RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 NUP210Q8TEM1 1887 aaPredicted RBP9.71□□□□□ -0.85
PHGDH-228ENST00000641847 CCDC66A2RUB6 948 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 OLFM2O95897 454 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 IGLV3-27P01718 113 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 APOEP02649 317 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 CKMP06732 381 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 KRT7P08729 469 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 IRF1P10914 325 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 PFKLP17858 780 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 DRD1P21728 446 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 CCR1P32246 355 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 DPP6P42658 865 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 CXCR3P49682 368 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 EIF4EBP2Q13542 120 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 HNRNPDQ14103 355 aaKnown RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 COL28A1Q2UY09 1125 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 ZC3H12AQ5D1E8 599 aaKnown RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 EFHC2Q5JST6 749 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 KCNT1Q5JUK3 1230 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 BRMS1LQ5PSV4 323 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 ZFYVE27Q5T4F4 411 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 LRRC38Q5VT99 294 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 TXNRD3NBQ6F5E7 133 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 CYP4V2Q6ZWL3 525 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 POLNQ7Z5Q5 900 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 ARL14EPQ8N8R7 260 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 MAB21L3Q8N8X9 362 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 TEKT4Q8WW24 435 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 HSPH1Q92598 858 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 NTAN1Q96AB6 310 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 ACDQ96AP0 544 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 PLD4Q96BZ4 506 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 FCRL2Q96LA5 508 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 HHIPQ96QV1 700 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 SLC22A12Q96S37 553 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 PSMB7Q99436 277 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 SNRNP25Q9BV90 132 aaKnown RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 TLR10Q9BXR5 811 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 RNF38Q9H0F5 515 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 CCDC86Q9H6F5 360 aaKnown RBP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 TASP1Q9H6P5 420 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 TMEM51Q9NW97 253 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 GPATCH2LQ9NWQ4 482 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.71□□□□□ -0.86
PHGDH-228ENST00000641847 PCDHA3Q9Y5H8 950 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 CPQQ9Y646 472 aa9.71□□□□□ -0.86
PHGDH-228ENST00000641847 TICRRQ7Z2Z1 1910 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SPAARA0A1B0GVQ0 90 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 FAM221BA6H8Z2 402 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 CDX4O14627 284 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 KCNK3O14649 394 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 RNF40O75150 1001 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 MOCS2O96007 188 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 RARAP10276 462 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 HDCP19113 662 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 HOXC13P31276 330 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 MAPK8P45983 427 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 DGKEP52429 567 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 RWDD2BP57060 319 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SCAPQ12770 1279 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 KRT81Q14533 505 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ARL13BQ3SXY8 428 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 TMEM196Q5HYL7 178 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 NUGGCQ68CJ6 796 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 PMS2CLQ68D20 193 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 KATNAL2Q8IYT4 538 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 BPIFB1Q8TDL5 484 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 PIGKQ92643 395 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ALG3Q92685 438 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SLC39A13Q96H72 371 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ZFYVE19Q96K21 471 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 CYP2S1Q96SQ9 504 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 KLF16Q9BXK1 252 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SLC46A2Q9BY10 475 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 TKTL2Q9H0I9 626 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SMG9Q9H0W8 520 aaKnown RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 DHX35Q9H5Z1 703 aaKnown RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ANLNQ9NQW6 1124 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 TMPRSS4Q9NRS4 437 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ARHGEF38Q9NXL2 777 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 DDX56Q9NY93 547 aaKnown RBP9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ZMYM5Q9UJ78 669 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 FZD10Q9ULW2 581 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 ARHGAP26Q9UNA1 814 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 AP4E1Q9UPM8 1137 aa9.7□□□□□ -0.86
PHGDH-228ENST00000641847 LRRD1A4D1F6 860 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 KCNU1A8MYU2 1149 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 UPK3BL1B0FP48 263 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 UPK3BL2E5RIL1 263 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 I6L893 689 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 TRDMT1O14717 391 aaKnown RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 DCLK1O15075 740 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms