RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 TDP1Q9NUW8 608 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 RRN3Q9NYV6 651 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 SORCS3Q9UPU3 1222 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 TLDC2A0PJX2 215 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 CFAP69A5D8W1 941 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 PIK3R2O00459 728 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 GRAP2O75791 330 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 RBP3P10745 1247 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TSHRP16473 764 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 ZFXP17010 805 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 HDCP19113 662 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 FCARP24071 287 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 RPL22P35268 128 aaKnown RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 ATP5C1P36542 298 aaKnown RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 DYNLT1P63172 113 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 IFI35P80217 286 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 FCHO2Q0JRZ9 810 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 MTA1Q13330 715 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 KRT81Q14533 505 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 DPYSL2Q16555 572 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 FAM78AQ5JUQ0 283 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 BTBD8Q5XKL5 378 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TXNDC8Q6A555 127 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TTC19Q6DKK2 380 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 CENPUQ71F23 418 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TAOK1Q7L7X3 1001 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 BNIPLQ7Z465 357 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 SCD5Q86SK9 330 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TDRPQ86YL5 185 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 ARID3BQ8IVW6 561 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 MFSD6LQ8IWD5 586 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 PPIL6Q8IXY8 311 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 UBALD2Q8IYN6 164 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 PLD5Q8N7P1 536 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 MAB21L3Q8N8X9 362 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 NAT8LQ8N9F0 302 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 RNF139Q8WU17 664 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 RSAD2Q8WXG1 361 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 DNASE1L2Q92874 299 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 SNRNP25Q9BV90 132 aaKnown RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 CALN1Q9BXU9 219 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 SLC46A2Q9BY10 475 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 CCDC134Q9H6E4 229 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 POPDC2Q9HBU9 364 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TRPC7Q9HCX4 862 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 TRPV5Q9NQA5 729 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 EURLQ9NYK6 297 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 FETUBQ9UGM5 382 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 GGA2Q9UJY4 613 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 HBS1LQ9Y450 684 aaKnown RBP10.56□□□□□ -0.72
PHGDH-224ENST00000641711 ACTL7BQ9Y614 415 aa10.56□□□□□ -0.72
PHGDH-224ENST00000641711 A0A087WUV0 522 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 A0A1W2PQH9 124 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 BCLAF3A2AJT9 711 aaKnown RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 GMNCA6NCL1 334 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 E7ESA3 106 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 E7EVH7 732 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 NDUFAB1O14561 156 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SLC9A3R1O14745 358 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 APOL1O14791 398 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 CHADO15335 359 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 COCHO43405 550 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 CDH16O75309 829 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 DAB1O75553 588 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 LATS1O95835 1130 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 FAM107AO95990 144 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 IFNB1P01574 187 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 MBL2P11226 248 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 LCP1P13796 627 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 GJA1P17302 382 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 PSMC3P17980 439 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 MATKP42679 507 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 GDF10P55107 478 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 COG7P83436 770 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 ATP11AP98196 1134 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 PFKPQ01813 784 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 XRCC4Q13426 336 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 TDGQ13569 410 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 ZNF77Q15935 545 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 CDO1Q16878 200 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 RAB6CQ53S08 254 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 ANKRD20A8PQ5CZ79 823 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 STXBP5Q5T5C0 1151 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 ERMARDQ5T6L9 678 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 BSPRYQ5W0U4 402 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 FOXR1Q6PIV2 292 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 B4GALNT4Q76KP1 1039 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 NLRP14Q86W24 1093 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SPATS2Q86XZ4 545 aaKnown RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 UNC45BQ8IWX7 931 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms