RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TBC1D3KA0A087X1G2 549 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 CLEC18AA5D8T8 446 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TBC1D3FA6NER0 549 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TBC1D3LB9A6J9 549 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-212ENST00000641247 RTN2O75298 545 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TBC1D3HP0C7X1 549 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 VAV1P15498 845 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 GOT1P17174 413 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 POLR2EP19388 210 aaKnown RBP10.07□□□□□ -0.8
PHGDH-212ENST00000641247 CR2P20023 1033 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 SLC6A4P31645 630 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 STAT6P42226 847 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 PSMD8P48556 350 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 NUMBP49757 651 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 CLDN10P78369 228 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TLE1Q04724 770 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TYRO3Q06418 890 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 BIRC3Q13489 604 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 FSCBQ5H9T9 825 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TBC1D3GQ6DHY5 549 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TBC1D3CQ6IPX1 549 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 RFWD3Q6PCD5 774 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 CLEC18BQ6UXF7 455 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-212ENST00000641247 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■■■□□ 15.6
PHGDH-212ENST00000641247 TADA2BQ86TJ2 420 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 UNC93AQ86WB7 457 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 NELFCDQ8IXH7 590 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TBC1D3Q8IZP1 549 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-212ENST00000641247 STK40Q8N2I9 435 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 OXR1Q8N573 874 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 XXYLT1Q8NBI6 393 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 CLEC18CQ8NCF0 446 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 PARD3BQ8TEW8 1205 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 PAGE5Q96GU1 130 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 DUSP16Q9BY84 665 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 CUEDC2Q9H467 287 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
PHGDH-212ENST00000641247 PNPLA8Q9NP80 782 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 FZD4Q9ULV1 537 aa10.07□□□□□ -0.8
PHGDH-212ENST00000641247 TULP2O00295 520 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 TBL1XO60907 577 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 NEBLO76041 1014 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
PHGDH-212ENST00000641247 RBMS1P29558 406 aaKnown RBP10.06□□□□□ -0.8
PHGDH-212ENST00000641247 CSKP41240 450 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 PDX1P52945 283 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 YWHAGP61981 247 aaKnown RBP eCLIP10.06□□□□□ -0.8
PHGDH-212ENST00000641247 C1QBPQ07021 282 aaKnown RBP10.06□□□□□ -0.8
PHGDH-212ENST00000641247 PNOCQ13519 176 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 IGFBP7Q16270 282 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 ZNF542PQ5EBM4 170 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 RAB41Q5JT25 222 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 C1orf220Q5T0J3 134 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 PIK3R6Q5UE93 754 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 FOXR1Q6PIV2 292 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 CRTC1Q6UUV9 634 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 IFI44Q8TCB0 444 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 FAM131CQ96AQ9 280 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 ARRDC3Q96B67 414 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 PLD4Q96BZ4 506 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 NOX5Q96PH1 765 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 CCNL2Q96S94 520 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-212ENST00000641247 MAGEF1Q9HAY2 307 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 IGSF5Q9NSI5 407 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 CYTH4Q9UIA0 394 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 SARDHQ9UL12 918 aa10.06□□□□□ -0.8
PHGDH-212ENST00000641247 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-212ENST00000641247 TEX15Q9BXT5 2789 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 MSI1O43347 362 aaKnown RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 PIAS2O75928 621 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 SMC2O95347 1197 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 WT1P19544 449 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 INCA1Q0VD86 236 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 STAT4Q14765 748 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 ARID5BQ14865 1188 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 DRAP1Q14919 205 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 STX1AQ16623 288 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 SGSM1Q2NKQ1 1148 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 C4orf17Q53FE4 359 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 SLC45A4Q5BKX6 768 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 ADGRF1Q5T601 910 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 NADSYN1Q6IA69 706 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 CLEC14AQ86T13 490 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 PRPF39Q86UA1 669 aaKnown RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 PIGZQ86VD9 579 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 IQCHQ86VS3 1027 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 GRAMD1CQ8IYS0 662 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 TMEM145Q8NBT3 493 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 SPATA20Q8TB22 786 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 MAPK15Q8TD08 544 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 EDEM1Q92611 657 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 ERCC4Q92889 916 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 KLHDC7BQ96G42 594 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 CDK5RAP1Q96SZ6 601 aaKnown RBP10.05□□□□□ -0.8
PHGDH-212ENST00000641247 MYOCQ99972 504 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms