RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DPP9Q86TI2 863 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 PNPLA1Q8N8W4 532 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 SIK2Q9H0K1 926 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 FZD10Q9ULW2 581 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 PARP14Q460N5 1801 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 C2P06681 752 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 NAGLUP54802 743 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 TPI1P60174 286 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 TBCCQ15814 346 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 SLC27A1Q6PCB7 646 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 SNX32Q86XE0 403 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 TTC39CQ8N584 583 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 KBTBD7Q8WVZ9 684 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 CATSPER2Q96P56 530 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 A0A0G2JLL6 359 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 COX4I1P13073 169 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 GRK2P25098 689 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 SPRP35270 261 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 TKTL1P51854 596 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 MRPS22P82650 360 aaKnown RBP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 BIRC2Q13490 618 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 FAM187BQ17R55 369 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 RWDD4Q6NW29 188 aaKnown RBP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 C4orf22Q6V702 233 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 PRRT2Q7Z6L0 340 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-221ENST00000640341 ERO1BQ86YB8 467 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 RNF135Q8IUD6 432 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 FAM156AQ8NDB6 213 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 KCNK16Q96T55 309 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 SH3GL3Q99963 347 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 C16orf70Q9BSU1 422 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 ATXN3LQ9H3M9 355 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 TCF7L2Q9NQB0 619 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 DDIT4Q9NX09 232 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 ASB14A6NK59 587 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 JCHAINP01591 159 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 PRKCGP05129 697 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SETSIPP0DME0 302 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SOX4Q06945 474 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SLC25A52Q3SY17 297 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 PTAR1Q7Z6K3 402 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 RNF169Q8NCN4 708 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 ZFP42Q96MM3 310 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 MKS1Q9NXB0 559 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 TLK1Q9UKI8 766 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SMIM28A0A1B0GU29 152 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 STX16-NPEPL1H3BU86 382 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 DYNC1LI2O43237 492 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 FKBP6O75344 327 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 FESP07332 822 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 MPP3Q13368 585 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 USP10Q14694 798 aaKnown RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 PRAMEF19Q5SWL8 479 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 ZDHHC17Q8IUH5 632 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 GALNT4Q8N4A0 578 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SNX31Q8N9S9 440 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 B3GALNT2Q8NCR0 500 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 DNAJB3Q8WWF6 145 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 APBB2Q92870 758 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 TMA16Q96EY4 203 aaKnown RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SNX27Q96L92 541 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 NFKBIZQ9BYH8 718 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 LRRC40Q9H9A6 602 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 NMRAL1Q9HBL8 299 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 ARHGAP26Q9UNA1 814 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 CITO14578 2027 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 NUP205Q92621 2012 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 DNAJC25-GNG10A0A024R161 153 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 AHCYL1O43865 530 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 MT-CO1P00395 513 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 NFKB1P19838 968 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 CALRP27797 417 aaKnown RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 GSTT1P30711 240 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SATB1Q01826 763 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 KLF10Q13118 480 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 POU6F1Q14863 301 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 PAN2Q504Q3 1202 aaKnown RBP14.91□□□□□ -0.02
SCARB2-221ENST00000640341 FAM219BQ5XKK7 198 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 WSCD1Q658N2 575 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 TIFABQ6ZNK6 161 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 KCNMB4Q86W47 210 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 RAB3IL1Q8TBN0 382 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 URGCPQ8TCY9 931 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 TSNARE1Q96NA8 513 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 OLFM3Q96PB7 478 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 CDRT15Q96T59 188 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 KLHL4Q9C0H6 718 aa14.91□□□□□ -0.02
SCARB2-221ENST00000640341 NRP1O14786 923 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 USP17L7P0C7H9 530 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 MARCH8Q5T0T0 291 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 FAM91A1Q658Y4 838 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 OR6J1Q8NGC5 347 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 PPP2R3CQ969Q6 453 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 GATA5Q9BWX5 397 aaPredicted RBP14.9□□□□□ -0.02
SCARB2-221ENST00000640341 ULBP1Q9BZM6 244 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 ANLNQ9NQW6 1124 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 STAP1Q9ULZ2 295 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms