RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 GRIA2P42262 883 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 BCAT1P54687 386 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 PKNOX1P55347 436 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 ZNF484Q5JVG2 852 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 TMEM198Q66K66 360 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 PGM2L1Q6PCE3 622 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 HFE2Q6ZVN8 426 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 CATSPER4Q7RTX7 472 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 SPATA6LQ8N4H0 392 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 TDRD5Q8NAT2 981 aaKnown RBP16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 DNAJC28Q9NX36 388 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 SSX2IPQ9Y2D8 614 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 AK5Q9Y6K8 562 aa16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 ZNF638Q14966 1978 aaKnown RBP16.92■□□□□ 0.3
HNRNPU-228ENST00000640306 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 OR6B1O95007 311 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 VCLP18206 1134 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 IGFBP6P24592 240 aaPredicted RBP16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 EPHX2P34913 555 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 CBLBQ13191 982 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 FBXW8Q8N3Y1 598 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 KBTBD7Q8WVZ9 684 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 OSMRQ99650 979 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 CHRAC1Q9NRG0 131 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SLC39A10Q9ULF5 831 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 INPP5FQ9Y2H2 1132 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 PPP2R3BQ9Y5P8 575 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SF3B1O75533 1304 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■■■■ 39.2
HNRNPU-228ENST00000640306 PHGDHO43175 533 aaKnown RBP16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 MLNP12872 115 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 GARSP41250 739 aaKnown RBP16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 CDK7P50613 346 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 ITGA7Q13683 1181 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 LIN52Q52LA3 116 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 NXNQ6DKJ4 435 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 FBXL19Q6PCT2 694 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 AAGABQ6PD74 315 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SNX32Q86XE0 403 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 APLFQ8IW19 511 aaPredicted RBP16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 RNF169Q8NCN4 708 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 NUF2Q9BZD4 464 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 CDH19Q9H159 772 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SNX25Q9H3E2 840 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 SETD4Q9NVD3 440 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 PCDHGB4Q9UN71 923 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 ARHGAP26Q9UNA1 814 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 PCDHGB5Q9Y5G0 923 aa16.91■□□□□ 0.3
HNRNPU-228ENST00000640306 RECQL4O94761 1208 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 TCN1P20061 433 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 GRM5P41594 1212 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 MATKP42679 507 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 C9orf57Q5W0N0 161 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 GATA5Q9BWX5 397 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 DNAJB4Q9UDY4 337 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 VANGL2Q9ULK5 521 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 MYOCOSA0A1B0GUC4 107 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 G3V2L1 256 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 H3BRB1 525 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 EEF2KO00418 725 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 C2P06681 752 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 UQCRBP14927 111 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 HOXA11P31270 313 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 HARS2P49590 506 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 SNX16P57768 344 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 MRPS22P82650 360 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 DEUP1Q05D60 604 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 ACAD11Q709F0 780 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 SATL1Q86VE3 508 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 ST13P4Q8IZP2 240 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 TTC39CQ8N584 583 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 BEST2Q8NFU1 509 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 RBBP8Q99708 897 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 SPATA16Q9BXB7 569 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 TUT1Q9H6E5 874 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 TCF7L2Q9NQB0 619 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 C20orf96Q9NUD7 363 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 PIGVQ9NUD9 493 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 DNAJC25-GNG10A0A024R161 153 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 STX16-NPEPL1H3BU86 382 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 CYP2C8P10632 490 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 OTUD1Q5VV17 481 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 SDCCAG8Q86SQ7 713 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 ZDHHC17Q8IUH5 632 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.9■□□□□ 0.32e-7■■□□□ 11.5
HNRNPU-228ENST00000640306 NUP205Q92621 2012 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 CPNE1Q99829 537 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 SIKE1Q9BRV8 207 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 PAPPA2Q9BXP8 1791 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 ANLNQ9NQW6 1124 aa16.9■□□□□ 0.3
HNRNPU-228ENST00000640306 H3BNX3 289 aa16.89■□□□□ 0.29
HNRNPU-228ENST00000640306 ZBTB24O43167 697 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-228ENST00000640306 ATP5BP06576 529 aaKnown RBP16.89■□□□□ 0.29
HNRNPU-228ENST00000640306 SPRP35270 261 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-228ENST00000640306 ZNF460Q14592 562 aa16.89■□□□□ 0.29
HNRNPU-228ENST00000640306 PDK1Q15118 436 aa16.89■□□□□ 0.29
HNRNPU-228ENST00000640306 GRIK4Q16099 956 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms