RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TSHZ1Q6ZSZ6 1077 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 PCDH20Q8N6Y1 951 aaKnown RBP14.69□□□□□ -0.06
SCARB2-216ENST00000639300 MARK4Q96L34 752 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 IL22Q9GZX6 179 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 MID1IP1Q9NPA3 183 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 MARCH2Q9P0N8 246 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 STXBP5LQ9Y2K9 1186 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 ZNF711Q9Y462 761 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 C2orf71A6NGG8 1288 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 CYP1A1P04798 512 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-216ENST00000639300 WEE1P30291 646 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 CDK7P50613 346 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 NR6A1Q15406 480 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 ZDHHC24Q6UX98 284 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 LGI2Q8N0V4 545 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 LRRC52Q8N7C0 313 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 ZNF555Q8NEP9 628 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 PRKD2Q9BZL6 878 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 COG4Q9H9E3 785 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 KATNA1O75449 491 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 KRT36O76013 467 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 GUCA1CO95843 209 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 TSPAN8P19075 237 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 MAXP61244 160 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 MYO9BQ13459 2157 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 FNBP1LQ5T0N5 605 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 DCAF12L1Q5VU92 463 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 RIPOR1Q6ZS17 1223 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 TMEM86AQ8N2M4 240 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 PLEKHO2Q8TD55 490 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 APPL1Q9UKG1 709 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 ST3GAL5Q9UNP4 418 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 LRCH1Q9Y2L9 728 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 KPNA6O60684 536 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 CCNB1P14635 433 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 BRCC3P46736 316 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 USP50Q70EL3 339 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 ALYREFQ86V81 257 aaKnown RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 MIER2Q8N344 545 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 FITM2Q8N6M3 262 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 MRPS31Q92665 395 aaKnown RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 UBXN6Q9BZV1 441 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 GPBP1L1Q9HC44 474 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 PLA2G4CQ9UP65 541 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 RAG1P15918 1043 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 PSMC3P17980 439 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 NRLP54845 237 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 MRPS5P82675 430 aaKnown RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 FASTKQ14296 549 aaKnown RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SLC4A11Q8NBS3 891 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 JADE3Q92613 823 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 ACOX2Q99424 681 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SPASTQ9UBP0 616 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SAC3D1A6NKF1 404 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 CRABP2P29373 138 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 MRPS22P82650 360 aaKnown RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 UGT3A1Q6NUS8 523 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 CSPG4P5Q96PW8 444 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 NDNQ99608 321 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SEPHS2Q99611 448 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SYBUQ9NX95 663 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 A8MX80 341 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 H7C4K7 107 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 RAB27AP51159 221 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 USP4Q13107 963 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 UBAP2LQ14157 1087 aaKnown RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 RRM2BQ7LG56 351 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 ECHDC2Q86YB7 292 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SLC41A1Q8IVJ1 513 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 SH3GL3Q99963 347 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 ACE2Q9BYF1 805 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-216ENST00000639300 POMKQ9H5K3 350 aa14.68□□□□□ -0.06
SCARB2-216ENST00000639300 TBKBP1A7MCY6 615 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 SMNDC1O75940 238 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARB2-216ENST00000639300 PSMG1O95456 288 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 VNN1O95497 513 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 CCDC166P0CW27 439 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 ME2P23368 584 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 DMC1Q14565 340 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 ATP6AP1LQ52LC2 224 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 AARS2Q5JTZ9 985 aaKnown RBP14.67□□□□□ -0.06
SCARB2-216ENST00000639300 C9orf57Q5W0N0 161 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 OLFML2BQ68BL8 750 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 CYP4X1Q8N118 509 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 FBXO39Q8N4B4 442 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 KCTD4Q8WVF5 259 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 NMD3Q96D46 503 aaKnown RBP14.67□□□□□ -0.06
SCARB2-216ENST00000639300 CAB39LQ9H9S4 337 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 ENTPD7Q9NQZ7 604 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 ACSS2Q9NR19 701 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 FAM32AQ9Y421 112 aaKnown RBP14.67□□□□□ -0.06
SCARB2-216ENST00000639300 PCDHA11Q9Y5I1 949 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 MRASO14807 208 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 LRG1P02750 347 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 RANBP1P43487 201 aa14.67□□□□□ -0.06
SCARB2-216ENST00000639300 HADHBP55084 474 aaKnown RBP14.67□□□□□ -0.06
SCARB2-216ENST00000639300 SH3PXD2AQ5TCZ1 1133 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms