RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MRPL42Q9Y6G3 142 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 FAM237AA0A1B0GTK4 181 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 PAEPP09466 180 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 CCDC130P13994 396 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 PPP3CAQ08209 521 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 DGCR6Q14129 220 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF284Q2VY69 593 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 CTXN3Q4LDR2 81 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MARK2Q7KZI7 788 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 TMEM132CQ8N3T6 1108 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 FBXW8Q8N3Y1 598 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ALLCQ8N6M5 410 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 EFCAB3Q8N7B9 438 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 TRIM63Q969Q1 353 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 UBAP1Q9NZ09 502 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 CASTOR2A6NHX0 329 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 SERPINF2P08697 491 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 KCTD19Q17RG1 926 aaPredicted RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MSL3Q8N5Y2 521 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 WDR60Q8WVS4 1066 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ZBTB45Q96K62 511 aaPredicted RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 RPS6KB2Q9UBS0 482 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 PNMA8CA0A1B0GUJ8 204 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 BTNL10A8MVZ5 291 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 BTN3A1O00481 513 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 PURAQ00577 322 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 BFSP2Q13515 415 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 CAMK1DQ8IU85 385 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 SYT15Q9BQS2 421 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 E5RJQ4 531 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 NUDT17P0C025 328 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 NUP62P37198 522 aaPredicted RBP18.81■□□□□ 0.6
SCARB2-213ENST00000638680 ALDH7A1P49419 539 aaKnown RBP18.81■□□□□ 0.6
SCARB2-213ENST00000638680 TUBP50607 506 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 CRADDP78560 199 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 DUPD1Q68J44 220 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF605Q86T29 641 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 EMILIN2Q9BXX0 1053 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 ADPRHL2Q9NX46 363 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 CENPXA8MT69 81 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 TSPAN3O60637 253 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 MARCKSL1P49006 195 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 ALDH9A1P49189 494 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 STARD3Q14849 445 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 PWWP2AQ96N64 755 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 CLIC5Q9NZA1 410 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 AHCYL1O43865 530 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF286BP0CG31 522 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 CETPP11597 493 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 DARSP14868 501 aaKnown RBP18.81■□□□□ 0.6
SCARB2-213ENST00000638680 MSLNQ13421 630 aaPredicted RBP18.81■□□□□ 0.6
SCARB2-213ENST00000638680 C11orf88Q6PI97 169 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 MAP4K3Q8IVH8 894 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 PRELID2Q8N945 189 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 FNIP1Q8TF40 1166 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 DIP2AQ14689 1571 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 SLIT1O75093 1534 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 LACTBL1A8MY62 500 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 FLT3P36888 993 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 GRIA3P42263 894 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 SLC20A2Q08357 652 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 LY6KQ17RY6 165 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 SHROOM1Q2M3G4 852 aaPredicted RBP18.81■□□□□ 0.6
SCARB2-213ENST00000638680 OOSP2Q86WS3 158 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 UXS1Q8NBZ7 420 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 NACC2Q96BF6 587 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 OSMRQ99650 979 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 HGH1Q9BTY7 390 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 RRN3Q9NYV6 651 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 INVSQ9Y283 1065 aa18.81■□□□□ 0.6
SCARB2-213ENST00000638680 ABHD2P08910 425 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 ATP6V1C1P21283 382 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 ARHGAP15Q53QZ3 475 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 METTL7BQ6UX53 244 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 TRIM48Q8IWZ4 208 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 LMTK2Q8IWU2 1503 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 KLRC4O43908 158 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCARB2-213ENST00000638680 FMO4P31512 558 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 RENBPP51606 427 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 CSNK2BP67870 215 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF662Q6ZS27 426 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 SLC41A1Q8IVJ1 513 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 SEMA4BQ9NPR2 832 aaPredicted RBP18.8■□□□□ 0.6
SCARB2-213ENST00000638680 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 H3BN98 237 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 EGFRP00533 1210 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 PSMA3P25788 255 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 TTC27Q6P3X3 843 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 BRSK2Q8IWQ3 736 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 FBXO30Q8TB52 745 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 ANKRD49Q8WVL7 239 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 CRYL1Q9Y2S2 319 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 SPACA6W5XKT8 324 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 CYP1A1P04798 512 aaPredicted RBP18.8■□□□□ 0.6
SCARB2-213ENST00000638680 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
SCARB2-213ENST00000638680 SLC26A2P50443 739 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 QPCTQ16769 361 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 PARP6Q2NL67 630 aa18.8■□□□□ 0.6
SCARB2-213ENST00000638680 FGD3Q5JSP0 725 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms