RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 MROH8Q9H579 483 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 COMMD3-BMI1R4GMX3 469 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 A0A096LPK6 155 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 E9PBE3 544 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 KLHL41O60662 606 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 TRIM13O60858 407 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 GMPRP36959 345 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 LAMB3Q13751 1172 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 SLC9B1Q4ZJI4 515 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 GJC2Q5T442 439 aaPredicted RBP20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 OR52K1Q8NGK4 314 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 SLC2A14Q8TDB8 520 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 OTUD5Q96G74 571 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 BFARQ9NZS9 450 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 MID2Q9UJV3 735 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 PAPPA2Q9BXP8 1791 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 SCN4AP35499 1836 aa20.56■□□□□ 0.88
SYNGAP1-227ENST00000638142 E2F8A0AVK6 867 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 H3BNX3 289 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 XPO1O14980 1071 aaKnown RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 AP2A1O95782 977 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 PABPC4LP0CB38 370 aaKnown RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 ZNF286BP0CG31 522 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 GLDCP23378 1020 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 PEX6Q13608 980 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 DPYSQ14117 519 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 FBXO47Q5MNV8 452 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 SLC27A1Q6PCB7 646 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 NAPRTQ6XQN6 538 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 ARMCX2Q7L311 632 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 NETO2Q8NC67 525 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 HIPK4Q8NE63 616 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 NT5C3BQ969T7 300 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 OXCT2Q9BYC2 517 aaPredicted RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 TCF7L2Q9NQB0 619 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 KLHL8Q9P2G9 620 aaPredicted RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 VANGL2Q9ULK5 521 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 PRPF19Q9UMS4 504 aaKnown RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 OTOFQ9HC10 1997 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 MMEL1Q495T6 779 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 DCAF6Q58WW2 860 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 OTUD1Q5VV17 481 aaPredicted RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 BNIPLQ7Z465 357 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 TDRD5Q8NAT2 981 aaKnown RBP20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 SNX25Q9H3E2 840 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 MAN1C1Q9NR34 630 aa20.55■□□□□ 0.88
SYNGAP1-227ENST00000638142 CXCL11O14625 94 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 CREB3O43889 395 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ZMPSTE24O75844 475 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 LMO2P25791 158 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 HOXA11P31270 313 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 NOS2P35228 1153 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 SH3BGRP55822 239 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ATXN7L3BQ96GX2 97 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 CNDP1Q96KN2 507 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 C16orf70Q9BSU1 422 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ZCWPW2A0A1B0GU75 182 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 DCLK1O15075 740 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 TIMM44O43615 452 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 THRAP10827 490 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 HK2P52789 917 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 CSE1LP55060 971 aaKnown RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 DLG1Q12959 904 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ANKRD20A4Q4UJ75 823 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 GLRA4Q5JXX5 417 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 OGFRL1Q5TC84 451 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 PDZD4Q76G19 769 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ARHGAP22Q7Z5H3 698 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ICA1LQ8NDH6 482 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 URGCPQ8TCY9 931 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 MAPK15Q8TD08 544 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 LENG8Q96PV6 779 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 NPY6RQ99463 290 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 SERPINI1Q99574 410 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 EPAS1Q99814 870 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 ELP3Q9H9T3 547 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 NMRAL1Q9HBL8 299 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 C6orf203Q9P0P8 240 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 STK39Q9UEW8 545 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 STAP1Q9ULZ2 295 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 UBQLN1Q9UMX0 589 aaKnown RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 RAD54BQ9Y620 910 aa20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 POLR2AP24928 1970 aaKnown RBP20.54■□□□□ 0.88
SYNGAP1-227ENST00000638142 EEF2KO00418 725 aaKnown RBP20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 APOA4P06727 396 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 ADIGQ0VDE8 80 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 PIGZQ86VD9 579 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 SLC7A14Q8TBB6 771 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 ILKAPQ9H0C8 392 aaPredicted RBP20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 CASS4Q9NQ75 786 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 TMPRSS4Q9NRS4 437 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 GDAP2Q9NXN4 497 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 PSMD13Q9UNM6 376 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 A0A1B0GVG6 124 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 ERI2A8K979 691 aaKnown RBP20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 KCNK1O00180 336 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 C2P06681 752 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 PTPN3P26045 913 aa20.53■□□□□ 0.88
SYNGAP1-227ENST00000638142 LSAMPQ13449 338 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms