RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ZMPSTE24O75844 475 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 CRYZL1O95825 349 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 FAM86B2P0C5J1 330 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 HOXD10P28358 340 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TM4SF1P30408 202 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 BMPR1AP36894 532 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 PRELPP51888 382 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 RPS8P62241 208 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 OCA2Q04671 838 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 GABPAQ06546 454 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TRAP1Q12931 704 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 PEX6Q13608 980 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 LRP8Q14114 963 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 RFPL4BQ6ZWI9 263 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 FAM20CQ8IXL6 584 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 PPM1NQ8N819 430 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 NIPA2Q8N8Q9 360 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 ABHD11Q8NFV4 315 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 FNIP1Q8TF40 1166 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 DCAF4Q8WV16 495 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 LRRC39Q96DD0 335 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 SLC29A1Q99808 456 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 RAD21L1Q9H4I0 556 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 SP140LQ9H930 580 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 SERPINB13Q9UIV8 391 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TMA7Q9Y2S6 64 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 GOLGA8QA0A0J9YX86 632 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TCRBV7S3A2A0A539 114 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TCRBV3S1A0A5B6 114 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 GOLGA8OA6NCC3 632 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 LRRIQ4A6NIV6 560 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 GOLGA8NF8WBI6 632 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 CHADO15335 359 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 GLRA3O75311 464 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 STAM2O75886 525 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 NELFEP18615 380 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 OPRL1P41146 370 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 LEPRP48357 1165 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 AP3M2P53677 418 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 C19orf57Q0VDD7 668 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 ATAD3BQ5T9A4 648 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 BBS12Q6ZW61 710 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 AKAP14Q86UN6 197 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 PARP8Q8N3A8 854 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 RSAD2Q8WXG1 361 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TP53INP1Q96A56 240 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 OR2B2Q9GZK3 357 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TP63Q9H3D4 680 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 PSMD11O00231 422 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 AIM2O14862 343 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 FKBP9O95302 570 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 HLCSP50747 726 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 HK2P52789 917 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 ABCE1P61221 599 aaKnown RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 NOMO3P69849 1222 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 GTF2BQ00403 316 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 TAZQ16635 292 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 C15orf52Q6ZUT6 534 aaKnown RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 LACC1Q8IV20 430 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 MAELQ96JY0 434 aaKnown RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 C17orf80Q9BSJ5 609 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 WDR11Q9BZH6 1224 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 NAA50Q9GZZ1 169 aaKnown RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 WDR41Q9HAD4 459 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 HOMER2Q9NSB8 354 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 PNPOQ9NVS9 261 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 ARHGEF35A5YM69 484 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 SYCE1LA8MT33 242 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 PLIN3O60664 434 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 PSMD10O75832 226 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 GJC1P36383 396 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 MLLT10P55197 1068 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 GNG2P59768 71 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 STX1BP61266 288 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 HSPA14Q0VDF9 509 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 PIGHQ14442 188 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 KCNJ11Q14654 390 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 PCLAFQ15004 111 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 MAPRE1Q15691 268 aaKnown RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 GRIK5Q16478 980 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 INSCQ1MX18 579 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 INAVAQ3KP66 663 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 SLC36A3Q495N2 470 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 CCDC81Q6ZN84 652 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 ZBTB49Q6ZSB9 765 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 KCTD8Q6ZWB6 473 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 GET4Q7L5D6 327 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-221ENST00000638141 SNX32Q86XE0 403 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 THNSL1Q8IYQ7 743 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 CNTD1Q8N815 330 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 CXorf38Q8TB03 319 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 CAPSLQ8WWF8 208 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 CPA5Q8WXQ8 436 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 ATP6V1E2Q96A05 226 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 ZNF385DQ9H6B1 395 aa12.25□□□□□ -0.45
CAPN3-221ENST00000638141 C12orf10Q9HB07 376 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms