RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 RHOQP17081 205 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 HMGA1P17096 107 aaKnown RBP12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 PPM1AP35813 382 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 RAB33AQ14088 237 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 NUGGCQ68CJ6 796 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 ARHGAP36Q6ZRI8 547 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 LRRC49Q8IUZ0 686 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 ATXN2LQ8WWM7 1075 aaKnown RBP12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 AGAP3Q96P47 875 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 CYP4F11Q9HBI6 524 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 TMEM248Q9NWD8 314 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 MPP6Q9NZW5 540 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 SENP1Q9P0U3 644 aa12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 HBS1LQ9Y450 684 aaKnown RBP12.55□□□□□ -0.4
CACNA1D-228ENST00000638120 TMEM120BA0PK00 339 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 ERI2A8K979 691 aaKnown RBP12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 SUN1O94901 812 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 HMBSP08397 361 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 NFKB1P19838 968 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 PRKCHP24723 683 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 KBTBD12Q3ZCT8 623 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 RAP1GAP2Q684P5 730 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 TIGD7Q6NT04 549 aaPredicted RBP12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 UNC5AQ6ZN44 842 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 GPR65Q8IYL9 337 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 MPP5Q8N3R9 675 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 BCAS4Q8TDM0 211 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 SLC44A1Q8WWI5 657 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 MYRFLQ96LU7 910 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 ZNF512Q96ME7 567 aaPredicted RBP12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 PRMT1Q99873 361 aaKnown RBP12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 NOL6Q9H6R4 1146 aaKnown RBP12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 DONSONQ9NYP3 566 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 DNMT3LQ9UJW3 386 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 MAD1L1Q9Y6D9 718 aa12.54□□□□□ -0.4
CACNA1D-228ENST00000638120 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 TRDMT1O14717 391 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 JCHAINP01591 159 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 KRT15P19012 456 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 ATP5C1P36542 298 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 MSH2P43246 934 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 NDST2P52849 883 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 STEAP4Q687X5 459 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 KLHDC8BQ8IXV7 354 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 GSDMBQ8TAX9 411 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 MRRFQ96E11 262 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 STAMBPL1Q96FJ0 436 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 IL12RB2Q99665 862 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 MLPHQ9BV36 600 aaPredicted RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 SDR42E2A6NKP2 422 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 DRGXA6NNA5 263 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 MATN3O15232 486 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 CACNG3O60359 315 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 PIAS1O75925 651 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 CCNB1P14635 433 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 KCNA4P22459 653 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 SEC24CP53992 1094 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 SESN2P58004 480 aaPredicted RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 VEPH1Q14D04 833 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 ALFQ53S48 1182 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 FBXL22Q6P050 247 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 TFAP2DQ7Z6R9 452 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 CHSY1Q86X52 802 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 CCNJLQ8IV13 435 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 MZB1Q8WU39 189 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 AUTS2Q8WXX7 1259 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 ARNTL2Q8WYA1 636 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 IGSF8Q969P0 613 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 CCDC134Q9H6E4 229 aa12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 MRPL17Q9NRX2 175 aaKnown RBP12.53□□□□□ -0.4
CACNA1D-228ENST00000638120 PRPF4O43172 522 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 CNTN5O94779 1100 aa12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 DNAJB2P25686 324 aa12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 MGAT1P26572 445 aa12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 KCNQ1P51787 676 aa12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 HTRA4P83105 476 aaPredicted RBP12.52□□□□□ -0.41
CACNA1D-228ENST00000638120 CREMQ03060 361 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms