RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PTPRDP23468 1912 aa22■■□□□ 1.11
CLN6-224ENST00000638076 T-ENOLP0DO92 83 aa22■■□□□ 1.11
CLN6-224ENST00000638076 SP3Q02447 781 aa22■■□□□ 1.11
CLN6-224ENST00000638076 ZSCAN18Q8TBC5 510 aaPredicted RBP22■■□□□ 1.11
CLN6-224ENST00000638076 ACMSDQ8TDX5 336 aa22■■□□□ 1.11
CLN6-224ENST00000638076 ZNF669Q96BR6 464 aaPredicted RBP22■■□□□ 1.11
CLN6-224ENST00000638076 TMEM120AQ9BXJ8 343 aa22■■□□□ 1.11
CLN6-224ENST00000638076 TRPV6Q9H1D0 765 aa22■■□□□ 1.11
CLN6-224ENST00000638076 HEY2Q9UBP5 337 aa22■■□□□ 1.11
CLN6-224ENST00000638076 MAGED2Q9UNF1 606 aaPredicted RBP22■■□□□ 1.11
CLN6-224ENST00000638076 CASP8AP2Q9UKL3 1982 aa22■■□□□ 1.11
CLN6-224ENST00000638076 DFFAO00273 331 aa22■■□□□ 1.11
CLN6-224ENST00000638076 CBX6O95503 412 aa22■■□□□ 1.11
CLN6-224ENST00000638076 PDE1CQ14123 709 aaPredicted RBP22■■□□□ 1.11
CLN6-224ENST00000638076 MBTPS1Q14703 1052 aa22■■□□□ 1.11
CLN6-224ENST00000638076 CLLU1OSQ5K130 101 aa22■■□□□ 1.11
CLN6-224ENST00000638076 BRMS1LQ5PSV4 323 aa22■■□□□ 1.11
CLN6-224ENST00000638076 CES4AQ5XG92 561 aa22■■□□□ 1.11
CLN6-224ENST00000638076 SLC24A5Q71RS6 500 aa22■■□□□ 1.11
CLN6-224ENST00000638076 CLNKQ7Z7G1 428 aa22■■□□□ 1.11
CLN6-224ENST00000638076 SCN4BQ8IWT1 228 aa22■■□□□ 1.11
CLN6-224ENST00000638076 CASP10Q92851 521 aa22■■□□□ 1.11
CLN6-224ENST00000638076 HAPLN3Q96S86 360 aa22■■□□□ 1.11
CLN6-224ENST00000638076 APOL2Q9BQE5 337 aa22■■□□□ 1.11
CLN6-224ENST00000638076 SMOC2Q9H3U7 446 aa22■■□□□ 1.11
CLN6-224ENST00000638076 NOD2Q9HC29 1040 aa22■■□□□ 1.11
CLN6-224ENST00000638076 UBP1Q9NZI7 540 aa22■■□□□ 1.11
CLN6-224ENST00000638076 NUDT5Q9UKK9 219 aa22■■□□□ 1.11
CLN6-224ENST00000638076 THSD7BQ9C0I4 1608 aa22■■□□□ 1.11
CLN6-224ENST00000638076 CHUKO15111 745 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 PAGE1O75459 146 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 EOMESO95936 686 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 BPGMP07738 259 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 CCR1P32246 355 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 IRX4P78413 519 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 PDE1BQ01064 536 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 SPDYAQ5MJ70 313 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 CERCAMQ5T4B2 595 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 ARHGAP36Q6ZRI8 547 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 SCD5Q86SK9 330 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 TMEM135Q86UB9 458 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 LRMDAQ9H2I8 198 aa21.99■■□□□ 1.11
CLN6-224ENST00000638076 ABI2Q9NYB9 513 aaPredicted RBP21.99■■□□□ 1.11
CLN6-224ENST00000638076 MTO1Q9Y2Z2 717 aaKnown RBP21.99■■□□□ 1.11
CLN6-224ENST00000638076 ATP9BO43861 1147 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 COG7P83436 770 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 DSC1Q08554 894 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 RIPK1Q13546 671 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 KYAT3Q6YP21 454 aaKnown RBP21.98■■□□□ 1.11
CLN6-224ENST00000638076 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLN6-224ENST00000638076 USP33Q8TEY7 942 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 LINC01599Q8WXQ3 324 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 GLT1D1Q96MS3 346 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 C7orf26Q96N11 449 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 CPNE1Q99829 537 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 NMUR1Q9HB89 426 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 SHROOM3Q8TF72 1996 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 BIRC5O15392 142 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 USP1O94782 785 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 GP5P40197 560 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 OR1G1P47890 313 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 NOMO2Q5JPE7 1267 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 C16orf46Q6P387 395 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 TRAF7Q6Q0C0 670 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLN6-224ENST00000638076 CNTD1Q8N815 330 aa21.98■■□□□ 1.11
CLN6-224ENST00000638076 ZCWPW2A0A1B0GU75 182 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 FAM237BA0A1B0GVD1 139 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 C2orf71A6NGG8 1288 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 MYL2P10916 166 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 CTC1Q2NKJ3 1217 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 OTOP3Q7RTS5 596 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 COLGALT2Q8IYK4 626 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 ATP2A3Q93084 1043 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 MFSD3Q96ES6 412 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 FCRL2Q96LA5 508 aaPredicted RBP21.97■■□□□ 1.11
CLN6-224ENST00000638076 ZNF395Q9H8N7 513 aaPredicted RBP21.97■■□□□ 1.11
CLN6-224ENST00000638076 PRG3Q9Y2Y8 225 aaPredicted RBP21.97■■□□□ 1.11
CLN6-224ENST00000638076 PATJQ8NI35 1801 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 A0A1W2PQH9 124 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 A8MUI8 341 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 GLRA3O75311 464 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 SERPINB3P29508 390 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 OCRLQ01968 901 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 ZNF33AQ06730 810 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 PRPSAP1Q14558 356 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 ANKRD20A4Q4UJ75 823 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 STXBP5Q5T5C0 1151 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 N4BP2L1Q5TBK1 243 aaPredicted RBP21.97■■□□□ 1.11
CLN6-224ENST00000638076 GRTP1Q5TC63 336 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 MAP3K21Q5TCX8 1036 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 ICE2Q659A1 982 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 ARHGAP12Q8IWW6 846 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 RAB3IL1Q8TBN0 382 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 URGCPQ8TCY9 931 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 SLC7A6OSQ96CW6 309 aaPredicted RBP21.97■■□□□ 1.11
CLN6-224ENST00000638076 HHIPL1Q96JK4 782 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 EMCNQ9ULC0 261 aa21.97■■□□□ 1.11
CLN6-224ENST00000638076 MRPL42Q9Y6G3 142 aaKnown RBP21.97■■□□□ 1.11
CLN6-224ENST00000638076 TPH1P17752 444 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms