RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SPAARA0A1B0GVQ0 90 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 GOLGA6L9A6NEM1 432 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 ARHGAP33O14559 1287 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 TIMM44O43615 452 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 CBFA2T3O75081 653 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 CNTN5O94779 1100 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 CFIP05156 583 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 CYP11B1P15538 503 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 HOXD12P35452 270 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 USP8P40818 1118 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 MTIF2P46199 727 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 GABRB2P47870 512 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 SLC11A2P49281 568 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 UBXN1Q04323 297 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 CETN1Q12798 172 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 GRIK2Q13002 908 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 BYSLQ13895 437 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 HNRNPA1L2Q32P51 320 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 PLEKHG6Q3KR16 790 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 C5orf22Q49AR2 442 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 ALFQ53S48 1182 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 SERPINA13PQ6UXR4 307 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 DBX2Q6ZNG2 339 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 NUDT18Q6ZVK8 323 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 SLC26A9Q7LBE3 791 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 FAM124AQ86V42 546 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 MFN1Q8IWA4 741 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 LGI2Q8N0V4 545 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 CARNMT1Q8N4J0 409 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 ZCCHC9Q8N567 271 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 AADATQ8N5Z0 425 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 TC2NQ8N9U0 490 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 HJURPQ8NCD3 748 aaPredicted RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 CADM4Q8NFZ8 388 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 SLC20A1Q8WUM9 679 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 PRCCQ92733 491 aaPredicted RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 FAM131CQ96AQ9 280 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 RPL10LQ96L21 214 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 PSMB7Q99436 277 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 BAG1Q99933 345 aaPredicted RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 NUP58Q9BVL2 599 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 RSPH9Q9H1X1 276 aaPredicted RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 VPS16Q9H269 839 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 PIGVQ9NUD9 493 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 ASNSD1Q9NWL6 643 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 TAB2Q9NYJ8 693 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 EIF2B4Q9UI10 523 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 NOCTQ9UK39 431 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 SARDHQ9UL12 918 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 ERVW-1Q9UQF0 538 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
PNKP-229ENST00000637897 DOCK4Q8N1I0 1966 aa8.1□□□□□ -1.11
PNKP-229ENST00000637897 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 C1QTNF9BB2RNN3 333 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 PLK4O00444 970 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 KCNK3O14649 394 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 ZSCAN12O43309 604 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 SH3BP5O60239 455 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 DAB1O75553 588 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 GJB6O95452 261 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 MT-CO1P00395 513 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 WNT1P04628 370 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 GLI1P08151 1106 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 MMEP08473 750 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 C1QTNF9P0C862 333 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 CEACAM1P13688 526 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 UCHL3P15374 230 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 DRD3P35462 400 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 FLT3P36888 993 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 PLK1P53350 603 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 JAM2P57087 298 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 SLC6A3Q01959 620 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 PTP4A2Q12974 167 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 AUHQ13825 339 aaKnown RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 STARD3Q14849 445 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 SHBQ15464 509 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 FNDC3BQ53EP0 1204 aaKnown RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 FKBP15Q5T1M5 1219 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 CHSY1Q86X52 802 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 XYLT1Q86Y38 959 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 BAHD1Q8TBE0 780 aaPredicted RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 EPS8L1Q8TE68 723 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 UCMAQ8WVF2 138 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 GATA6Q92908 595 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 BIRC7Q96CA5 298 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 BTN2A3PQ96KV6 586 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 PCDHB18PQ96TA0 734 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 GTPBP2Q9BX10 602 aaKnown RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 NUSAP1Q9BXS6 441 aaKnown RBP8.09□□□□□ -1.11
PNKP-229ENST00000637897 NEUROG2Q9H2A3 272 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 ARHGEF38Q9NXL2 777 aa8.09□□□□□ -1.11
PNKP-229ENST00000637897 TMEM59LQ9UK28 342 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms