RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ADH1BP00325 375 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 C1SP09871 688 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 ABCB4P21439 1286 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 TACR2P21452 398 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 RXRGP48443 463 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 BNIP3Q12983 259 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 ELAVL3Q14576 367 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 ZC3H12AQ5D1E8 599 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 FBXL19Q6PCT2 694 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 EID2Q8N6I1 236 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 STK32AQ8WU08 396 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 PRMT1Q99873 361 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 ERVMER34-1Q9H9K5 563 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 TPX2Q9ULW0 747 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 ASXL3Q9C0F0 2248 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 GOLGA4Q13439 2230 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 PSMA7O14818 248 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 SMC2O95347 1197 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 MOCS3O95396 460 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 IL1BP01584 269 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 APOEP02649 317 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 CDK4P11802 303 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 JUPP14923 745 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 PDGFRAP16234 1089 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 ITPKBP27987 946 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 ACADSBP45954 432 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 ARRB1P49407 418 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 NUMBP49757 651 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 PLK1P53350 603 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 TARDBPQ13148 414 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 SLC12A1Q13621 1099 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 RNF219Q5W0B1 726 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 CXorf57Q6NSI4 855 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 TMEM110Q86TL2 294 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 CHSY1Q86X52 802 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 CIR1Q86X95 450 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 NXPE2Q96DL1 559 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 ALG14Q96F25 216 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 DHTKD1Q96HY7 919 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 BTN2A3PQ96KV6 586 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 ST7Q9NRC1 585 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 SARDHQ9UL12 918 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 COL5A1P20908 1838 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 SETXQ7Z333 2677 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3DA0A087WVF3 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3IA0A087WXS9 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3EA0A087X179 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3KA0A087X1G2 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3FA6NER0 549 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 KCNU1A8MYU2 1149 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3LB9A6J9 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 E5RJQ4 531 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 RTN2O75298 545 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TRUB2O95900 331 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3HP0C7X1 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 BMP6P22004 513 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 HNF1BP35680 557 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 ABCG1P45844 678 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 RTP5Q14D33 572 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TAF5Q15542 800 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 MEA1Q16626 185 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3GQ6DHY5 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3CQ6IPX1 549 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TRIM59Q8IWR1 403 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TBC1D3Q8IZP1 549 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 CCAR2Q8N163 923 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 MFSD2AQ8NA29 543 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 OR52K2Q8NGK3 314 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 PIP4K2CQ8TBX8 421 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TRIM62Q9BVG3 475 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 KDM4CQ9H3R0 1056 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 PRORYQ9H606 182 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 POPDC2Q9HBU9 364 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 MAN1B1Q9UKM7 699 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 ATMQ13315 3056 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
CACNA1A-250ENST00000637809 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
CACNA1A-250ENST00000637809 F5H5T6 163 aa12.5□□□□□ -0.41
CACNA1A-250ENST00000637809 CAPN9O14815 690 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms