RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RPL10LQ96L21 214 aaKnown RBP14.22□□□□□ -0.13
PNKP-228ENST00000637325 MRGPRX3Q96LB0 322 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 AGPAT1Q99943 283 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 SELENOOQ9BVL4 669 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 ADAM33Q9BZ11 813 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 MTG2Q9H4K7 406 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
PNKP-228ENST00000637325 ADAM22Q9P0K1 906 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 SUSD2Q9UGT4 822 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 SLC25A13Q9UJS0 675 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 TMEM59LQ9UK28 342 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 SLC6A14Q9UN76 642 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 NCKAP1Q9Y2A7 1128 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 SNX10Q9Y5X0 201 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 DOCK9Q9BZ29 2069 aa14.22□□□□□ -0.13
PNKP-228ENST00000637325 EDDM13A0A1B0GTR0 161 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 MED19A0JLT2 244 aaPredicted RBP14.21□□□□□ -0.13
PNKP-228ENST00000637325 SYCE3A1L190 88 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 TARSL2A2RTX5 802 aaKnown RBP14.21□□□□□ -0.13
PNKP-228ENST00000637325 TTC34A8MYJ7 566 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 SERPINC1P01008 464 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 IGLV3-19P01714 112 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 CALB1P05937 261 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 RHOCP08134 193 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 UNGP13051 313 aaPredicted RBP14.21□□□□□ -0.13
PNKP-228ENST00000637325 PTMSP20962 102 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 MAOBP27338 520 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 SDC4P31431 198 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 MAPK8P45983 427 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 PLK1P53350 603 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 ATP11AP98196 1134 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 GFPT1Q06210 699 aaPredicted RBP14.21□□□□□ -0.13
PNKP-228ENST00000637325 CDO1Q16878 200 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 CLEC16AQ2KHT3 1053 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 KLHL40Q2TBA0 621 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 PPM1JQ5JR12 505 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 DCAF12L1Q5VU92 463 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 PEAR1Q5VY43 1037 aaPredicted RBP14.21□□□□□ -0.13
PNKP-228ENST00000637325 EMC1Q8N766 993 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 CADM4Q8NFZ8 388 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 RXFP2Q8WXD0 754 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 MYO19Q96H55 970 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 C1orf74Q96LT6 269 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 PCDHB18PQ96TA0 734 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 GTPBP2Q9BX10 602 aaKnown RBP14.21□□□□□ -0.13
PNKP-228ENST00000637325 MUC3BQ9H195 1237 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 MIR1-1HGQ9H1L0 117 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 SLCO3A1Q9UIG8 710 aa14.21□□□□□ -0.13
PNKP-228ENST00000637325 NCOR2Q9Y618 2525 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 TP53BP1Q12888 1972 aaPredicted RBP14.2□□□□□ -0.14
PNKP-228ENST00000637325 SRGAP2O75044 1071 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 SYPP08247 313 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 SERPINF2P08697 491 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 KRT3P12035 628 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 ENGP17813 658 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 TNFAIP3P21580 790 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 STK19P49842 368 aaPredicted RBP14.2□□□□□ -0.14
PNKP-228ENST00000637325 IRAK1P51617 712 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 ARL13BQ3SXY8 428 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 C5orf22Q49AR2 442 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 ACCSLQ4AC99 568 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 CXorf57Q6NSI4 855 aaKnown RBP14.2□□□□□ -0.14
PNKP-228ENST00000637325 TRNP1Q6NT89 227 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 FAM131BQ86XD5 332 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 PHF13Q86YI8 300 aaPredicted RBP14.2□□□□□ -0.14
PNKP-228ENST00000637325 SNX19Q92543 992 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 HAPLN3Q96S86 360 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 FEM1AQ9BSK4 669 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 BTBD1Q9H0C5 482 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 RSPH9Q9H1X1 276 aaPredicted RBP14.2□□□□□ -0.14
PNKP-228ENST00000637325 ANLNQ9NQW6 1124 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 TMPRSS4Q9NRS4 437 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 VPS28Q9UK41 221 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 SCML1Q9UN30 329 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 PCDH15Q96QU1 1955 aa14.2□□□□□ -0.14
PNKP-228ENST00000637325 ITIH6Q6UXX5 1313 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 METTL12A8MUP2 240 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 E9PAM4 449 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 CNTN5O94779 1100 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 GJB6O95452 261 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 SEMA4FO95754 770 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 KRT83P78385 493 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 C15orf59Q2T9L4 293 aaPredicted RBP14.19□□□□□ -0.14
PNKP-228ENST00000637325 ALFQ53S48 1182 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 C9orf64Q5T6V5 341 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 MMAAQ8IVH4 418 aaKnown RBP14.19□□□□□ -0.14
PNKP-228ENST00000637325 JOSD2Q8TAC2 188 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 OMDQ99983 421 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 FUCA2Q9BTY2 467 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 PCED1AQ9H1Q7 454 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 PABPC3Q9H361 631 aaKnown RBP14.19□□□□□ -0.14
PNKP-228ENST00000637325 SGK2Q9HBY8 427 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 FSCN3Q9NQT6 498 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 FBXL12Q9NXK8 326 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 MPP6Q9NZW5 540 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 MYO6Q9UM54 1294 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 TBC1D30Q9Y2I9 924 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 CHD5Q8TDI0 1954 aa14.19□□□□□ -0.14
PNKP-228ENST00000637325 TMEM131Q92545 1883 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms