RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 GABRG3Q99928 467 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 FEM1AQ9BSK4 669 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 SPON2Q9BUD6 331 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 MAGEH1Q9H213 219 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 DHX35Q9H5Z1 703 aaKnown RBP8.45□□□□□ -1.06
PNKP-226ENST00000636840 ZWILCHQ9H900 591 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 SPTLC3Q9NUV7 552 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 CACNA2D2Q9NY47 1150 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 MPP6Q9NZW5 540 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 USP18Q9UMW8 372 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 AP4E1Q9UPM8 1137 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 ERVW-1Q9UQF0 538 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 EPN1Q9Y6I3 576 aaPredicted RBP8.45□□□□□ -1.06
PNKP-226ENST00000636840 MUC6Q6W4X9 2439 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 COL4A2P08572 1712 aa8.45□□□□□ -1.06
PNKP-226ENST00000636840 TCRBV21S2A2A0A5A6 115 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 WASH3PC4AMC7 463 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 K7ESF4 209 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 EEF2KO00418 725 aaKnown RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 LRCH4O75427 683 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 CNTN5O94779 1100 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 RHOBTB1O94844 696 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 LRIG2O94898 1065 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 PROSCO94903 275 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 LMNAP02545 664 aaKnown RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 KRT7P08729 469 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 GGCXP38435 758 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 NBL1P41271 181 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 HCAR3P49019 387 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 GEMIN4P57678 1058 aaKnown RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 YBEYP58557 167 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 OGDHQ02218 1023 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 NHLH1Q02575 133 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 SIM2Q14190 667 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 MESDQ14696 234 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 POLD3Q15054 466 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 ALFQ53S48 1182 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 PPP6R3Q5H9R7 873 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 IL31Q6EBC2 164 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 ANO7Q6IWH7 933 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 TFAP2DQ7Z6R9 452 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 METTL3Q86U44 580 aaKnown RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 CIR1Q86X95 450 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 SFTPA1Q8IWL2 248 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 APCDD1Q8J025 514 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 LZTR1Q8N653 840 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 CCDC185Q8N715 623 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 NIPA2Q8N8Q9 360 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 WFDC5Q8TCV5 224 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 CYB5D2Q8WUJ1 264 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 TEKT4Q8WW24 435 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 HMGB4Q8WW32 186 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 PRCCQ92733 491 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 NELL1Q92832 810 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 ARHGEF26Q96DR7 871 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 MYEOVQ96EZ4 313 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 HHIPQ96QV1 700 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 ACOX2Q99424 681 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 BAG1Q99933 345 aaPredicted RBP8.44□□□□□ -1.06
PNKP-226ENST00000636840 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 TMEM248Q9NWD8 314 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 NCKAP1Q9Y2A7 1128 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 PCDHA13Q9Y5I0 950 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 SNX10Q9Y5X0 201 aa8.44□□□□□ -1.06
PNKP-226ENST00000636840 EDDM13A0A1B0GTR0 161 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 CXorf51AA0A1B0GTR3 108 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 ZSCAN5CA6NGD5 496 aaPredicted RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 H3BRJ5 948 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 CBX4O00257 560 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 RAMP2O60895 175 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 ADAM23O75077 832 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 RPP40O75818 363 aaKnown RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 NDUFA10O95299 355 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 LCA5LO95447 670 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 DNTTP04053 509 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 OXTRP30559 389 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 HOXC13P31276 330 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 IL12RB1P42701 662 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 SLC1A1P43005 524 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 RECQLP46063 649 aaPredicted RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 PXNP49023 591 aaPredicted RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 VASPP50552 380 aaPredicted RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 GNA12Q03113 381 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 ZBTB16Q05516 673 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 CCDC15Q0P6D6 951 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 ENPP2Q13822 863 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 KRT81Q14533 505 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 ELF2Q15723 593 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 IFI16Q16666 785 aaKnown RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 FUT11Q495W5 492 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 TMEM215Q68D42 235 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 CXorf57Q6NSI4 855 aaKnown RBP8.43□□□□□ -1.06
PNKP-226ENST00000636840 SLC36A4Q6YBV0 504 aa8.43□□□□□ -1.06
PNKP-226ENST00000636840 DSG4Q86SJ6 1040 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms