RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PDCD11Q14690 1871 aaKnown RBP19.32■□□□□ 0.68
CLN5-216ENST00000636780 DUSP11O75319 330 aaKnown RBP19.31■□□□□ 0.68
CLN5-216ENST00000636780 PGAM1P18669 254 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 SCNN1AP37088 669 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 LHX1P48742 406 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 PCBP1Q15365 356 aaKnown RBP eCLIP19.31■□□□□ 0.68
CLN5-216ENST00000636780 NUDCD1Q96RS6 583 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 IARS2Q9NSE4 1012 aaKnown RBP19.31■□□□□ 0.68
CLN5-216ENST00000636780 HACD1B0YJ81 288 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 PRR5-ARHGAP8B1AHC4 643 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 GYG2O15488 501 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 PTPN4P29074 926 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 GLRBP48167 497 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 ARHGAP8P85298 464 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 PRKCZQ05513 592 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 USP4Q13107 963 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 ITGA9Q13797 1035 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 SAPCD2Q86UD0 394 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 FRMD8Q9BZ67 464 aaPredicted RBP19.31■□□□□ 0.68
CLN5-216ENST00000636780 HCSTQ9UBK5 93 aa19.31■□□□□ 0.68
CLN5-216ENST00000636780 ARHGAP42A6NI28 874 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 ZNF487B1APH4 448 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 ALDH1A2O94788 518 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 SORBS2O94875 1100 aaKnown RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 ESRRAP11474 423 aaPredicted RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 FGF3P11487 239 aaPredicted RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 ITGA7Q13683 1181 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 POU6F1Q14863 301 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 KPNB1Q14974 876 aaKnown RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 DDR2Q16832 855 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 RAB41Q5JT25 222 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 FSTL4Q6MZW2 842 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 PSTKQ8IV42 348 aaKnown RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 TTC9BQ8N6N2 239 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 CASP10Q92851 521 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 SMARCD1Q96GM5 515 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 NSL1Q96IY1 281 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 NMUR1Q9HB89 426 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 CNGB3Q9NQW8 809 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 OSER1Q9NX31 292 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 TXNDC16Q9P2K2 825 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 PRG3Q9Y2Y8 225 aaPredicted RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 SCN4AP35499 1836 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 ZCWPW2A0A1B0GU75 182 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 GSC2O15499 205 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 POLBP06746 335 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 SLC8A1P32418 973 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 GRIK1P39086 918 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 GARSP41250 739 aaKnown RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 SKIV2L2P42285 1042 aaKnown RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 PCLAFQ15004 111 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 STEAP4Q687X5 459 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 ZNF280DQ6N043 979 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 C14orf80Q86SX3 495 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 N4BP2L2Q92802 583 aaPredicted RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 SNX15Q9NRS6 342 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 C20orf96Q9NUD7 363 aaPredicted RBP19.3■□□□□ 0.68
CLN5-216ENST00000636780 MCM8Q9UJA3 840 aa19.3■□□□□ 0.68
CLN5-216ENST00000636780 C9IYK1 514 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 PHGDHO43175 533 aaKnown RBP19.29■□□□□ 0.68
CLN5-216ENST00000636780 ZMPSTE24O75844 475 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 TBX18O95935 607 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 GRK4P32298 578 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 CHRNA4P43681 627 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 GJA9P57773 515 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 LPIN1Q14693 890 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 NAPRTQ6XQN6 538 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 MAVSQ7Z434 540 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 SERINC5Q86VE9 423 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 SLC25A41Q8N5S1 370 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 ZNF570Q96NI8 536 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 SLC38A7Q9NVC3 462 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 G3BP2Q9UN86 482 aaKnown RBP19.29■□□□□ 0.68
CLN5-216ENST00000636780 HBS1LQ9Y450 684 aaKnown RBP19.29■□□□□ 0.68
CLN5-216ENST00000636780 B2RBV5 119 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 PLIN3O60664 434 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 TEDDM1Q5T9Z0 273 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 MBLAC2Q68D91 279 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 BZW1Q7L1Q6 419 aaKnown RBP19.29■□□□□ 0.68
CLN5-216ENST00000636780 IPMKQ8NFU5 416 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 FTHL17Q9BXU8 183 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 ABI2Q9NYB9 513 aaPredicted RBP19.29■□□□□ 0.68
CLN5-216ENST00000636780 SLC2A6Q9UGQ3 507 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 CDH9Q9ULB4 789 aa19.29■□□□□ 0.68
CLN5-216ENST00000636780 MAP2K2P36507 400 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 CTBP1Q13363 440 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 ANKRD20A4Q4UJ75 823 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 MARK2Q7KZI7 788 aaKnown RBP19.28■□□□□ 0.68
CLN5-216ENST00000636780 TFAP2DQ7Z6R9 452 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 CRLF3Q8IUI8 442 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 RAB3IPQ96QF0 476 aaPredicted RBP19.28■□□□□ 0.68
CLN5-216ENST00000636780 FAM167BQ9BTA0 163 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 PMPCBO75439 489 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 KRT36O76013 467 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 DDHD2O94830 711 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 AP2A1O95782 977 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 CYBAP13498 195 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 SLC1A6P48664 564 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 ARPP19P56211 112 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 PPIDQ08752 370 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms