RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CELF3	Q5SZQ8	465 aa	Known RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	C15orf39	Q6ZRI6	1047 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	LINC00299	Q6ZSB3	139 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SH2D5	Q6ZV89	423 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	TAS1R3	Q7RTX0	852 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SETD3	Q86TU7	594 aa	Predicted RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	COLGALT2	Q8IYK4	626 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	CADM3	Q8N126	398 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SLC43A3	Q8NBI5	491 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GOLM1	Q8NBJ4	401 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SLC20A1	Q8WUM9	679 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	ATL1	Q8WXF7	558 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	KREMEN1	Q96MU8	473 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	FAM111A	Q96PZ2	611 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	ALPK1	Q96QP1	1244 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	RTKN	Q9BST9	563 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	DCUN1D5	Q9BTE7	237 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	FRMD8	Q9BZ67	464 aa	Predicted RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	SMARCAD1	Q9H4L7	1026 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	CAAP1	Q9H8G2	361 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SIAE	Q9HAT2	523 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	DAPK2	Q9UIK4	370 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	ARHGAP26	Q9UNA1	814 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	DRG1	Q9Y295	367 aa	Known RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	PCDHGA11	Q9Y5H2	935 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	PLXNA1	Q9UIW2	1896 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	DNAJC25-GNG10	A0A024R161	153 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306		A0A0B4J269	797 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GOLGA8Q	A0A0J9YX86	632 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GOLGA8O	A6NCC3	632 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GOLGA8N	F8WBI6	632 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306		H3BMQ9	156 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GOLGA8R	I6L899	631 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GMNN	O75496	209 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	PROC	P04070	461 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SOX10	P56693	466 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	GPX6	P59796	221 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	YWHAE	P62258	255 aa	Known RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	TMPRSS15	P98073	1019 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	ITGAD	Q13349	1161 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	TUBB3	Q13509	450 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	CAPS	Q13938	189 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	LRP8	Q14114	963 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	PTK2B	Q14289	1009 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	PDK1	Q15118	436 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	KRT80	Q6KB66	452 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	C4orf22	Q6V702	233 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	ARC	Q7LC44	396 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	HPS6	Q86YV9	775 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	BRSK2	Q8IWQ3	736 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	FAM20C	Q8IXL6	584 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	DEFB107A	Q8IZN7	70 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	TTC30B	Q8N4P2	665 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SLC15A4	Q8N697	577 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	TMCO5A	Q8N6Q1	288 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SHKBP1	Q8TBC3	707 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	RASSF5	Q8WWW0	418 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	SEMA4D	Q92854	862 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	ATP2A3	Q93084	1043 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	MAEL	Q96JY0	434 aa	Known RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	COG8	Q96MW5	612 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	TUBA1C	Q9BQE3	449 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	RMND5A	Q9H871	391 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	OLAH	Q9NV23	265 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	FKBP14	Q9NWM8	211 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	APOBEC2	Q9Y235	224 aa	Known RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	DNAJC16	Q9Y2G8	782 aa		11	□□□□□ -0.65
CHD2-223	ENST00000636306	RBMX2	Q9Y388	322 aa	Known RBP	11	□□□□□ -0.65
CHD2-223	ENST00000636306	ILVBL	A1L0T0	632 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	FAM172BP	A6NC97	362 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	SYCE1L	A8MT33	242 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	HBP1	O60381	514 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	CLUH	O75153	1309 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	TOM1L1	O75674	476 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	SGPL1	O95470	568 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	HLA-DRA	P01903	254 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	ZNF26	P17031	533 aa	Predicted RBP	10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	M6PR	P20645	277 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	PRKACB	P22694	351 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	THOP1	P52888	689 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	CTAG1A	P78358	180 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	ADAM17	P78536	824 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	IFITM2	Q01629	132 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	CD300C	Q08708	224 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	HSPA14	Q0VDF9	509 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	EIF2B5	Q13144	721 aa	Known RBP	10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	SELENBP1	Q13228	472 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	BOLA3	Q53S33	107 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	LIN9	Q5TKA1	542 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	ACAD10	Q6JQN1	1059 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	KIAA1841	Q6NSI8	718 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	XKR5	Q6UX68	686 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	CCDC81	Q6ZN84	652 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	GSTA5	Q7RTV2	222 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	C14orf80	Q86SX3	495 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	IGFN1	Q86VF2	1251 aa		10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	DCP2	Q8IU60	420 aa	Known RBP	10.99	□□□□□ -0.65
CHD2-223	ENST00000636306	WDR49	Q8IV35	697 aa		10.99	□□□□□ -0.65

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