RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DTLQ9NZJ0 730 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 PACSIN3Q9UKS6 424 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CFLARO15519 480 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 NFICP08651 508 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 RPL14P50914 215 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 MS4A2Q01362 244 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 TMED1Q13445 227 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 GK3PQ14409 553 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 LSM12Q3MHD2 195 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 AMIGO2Q86SJ2 522 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF554Q86TJ5 538 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 CHERPQ8IWX8 916 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 DNERQ8NFT8 737 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 EME1Q96AY2 570 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 CSPG4P5Q96PW8 444 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 NT5C1AQ9BXI3 368 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 TEX13BQ9BXU2 312 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 SLC4A5Q9BY07 1137 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 NUF2Q9BZD4 464 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 NMRAL1Q9HBL8 299 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 HESX1Q9UBX0 185 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 A0A096LPK6 155 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 ERVK-10P10266 1014 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 ENO3P13929 434 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 NDST1P52848 882 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 TUBA4AP68366 448 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 PRKAA1Q13131 559 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 FRG1Q14331 258 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 CMC1Q7Z7K0 106 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 CLEC14AQ86T13 490 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 SLC7A14Q8TBB6 771 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 GATA5Q9BWX5 397 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 DRC3Q9H069 523 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 FZD8Q9H461 694 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 OXSMQ9NWU1 459 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 SYBUQ9NX95 663 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 ADAMTS5Q9UNA0 930 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 AP4E1Q9UPM8 1137 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 TNFSF13BQ9Y275 285 aa15.12■□□□□ 0.01
CACNA1A-220ENST00000635988 ACOT8O14734 319 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 H6PDO95479 791 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 PFKMP08237 780 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF26P17031 533 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 CYP3A5P20815 502 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 TCF7P36402 384 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ALDH3B2P48448 385 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 RGS7P49802 495 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 GALK1P51570 392 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 PKNOX1P55347 436 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 PPP2R5DQ14738 602 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 PPM1LQ5SGD2 360 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ISLR2Q6UXK2 745 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 TMEM110Q86TL2 294 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 PLD6Q8N2A8 252 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 AGBL3Q8NEM8 1001 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ABTB1Q969K4 478 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 TOP1MTQ969P6 601 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 HPDLQ96IR7 371 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF597Q96LX8 424 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 CDT1Q9H211 546 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF385DQ9H6B1 395 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 WDR55Q9H6Y2 383 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 LRRC40Q9H9A6 602 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 MRGBPQ9NV56 204 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 TRIM38O00635 465 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 TIMM44O43615 452 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF189O75820 626 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 HNRNPCP07910 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 HADHAP40939 763 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 GOLGA7BQ2TAP0 167 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 NCBP2-AS2Q69YL0 99 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 DHRS4L2Q6PKH6 230 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 STRA8Q7Z7C7 330 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 FNDC8Q8TC99 324 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 PGBD4Q96DM1 585 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ZBED3Q96IU2 234 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ASB7Q9H672 318 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ZBTB26Q9HCK0 441 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 HACD3Q9P035 362 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 CDYLQ9Y232 598 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 MYRFQ9Y2G1 1151 aa15.11■□□□□ 0.01
CACNA1A-220ENST00000635988 ARHGEF37A1IGU5 675 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 LACTBL1A8MY62 500 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 FARP2O94887 1054 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 CHRNA5P30532 468 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 ARL4AP40617 200 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 MLH1P40692 756 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 BACE1P56817 501 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 NUP107P57740 925 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 MGAT5BQ3V5L5 792 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 BSPRYQ5W0U4 402 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 EEF1DP3Q658K8 133 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 JADE1Q6IE81 842 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 FSTL4Q6MZW2 842 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 CXorf38Q8TB03 319 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 HM13Q8TCT9 377 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 URGCPQ8TCY9 931 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms