RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 UBXN10Q96LJ8 280 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 PPP1R9BQ96SB3 815 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 KATNAL1Q9BW62 490 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 REXO4Q9GZR2 422 aaKnown RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 NYXQ9GZU5 481 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 VPS16Q9H269 839 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 FAM83DQ9H4H8 585 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 HEYLQ9NQ87 328 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 BABAM1Q9NWV8 329 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 ZSCAN32Q9NX65 697 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 ETAA1Q9NY74 926 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 RRN3Q9NYV6 651 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 HESX1Q9UBX0 185 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CA14Q9ULX7 337 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 ATP6V0A2Q9Y487 856 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 TRANK1O15050 2925 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CEP290O15078 2479 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CACNA1FO60840 1977 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 AQP7P3A6NL99 342 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 AQP12BA6NM10 295 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 TARM1B6A8C7 271 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 RAB27BO00194 218 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 IPO5O00410 1097 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 PPP6CO00743 305 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 PIP5K1BO14986 540 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 CA12O43570 354 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 GLP2RO95838 553 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 AGR2O95994 175 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 HNRNPCP07910 306 aaKnown RBP eCLIP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 HOXB7P09629 217 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 ATXN1LP0C7T5 689 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 TPH1P17752 444 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 ALDH1B1P30837 517 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MAP2K2P36507 400 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 GMPSP49915 693 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 TOB1P50616 345 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 NANOS2P60321 138 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MAP2K1Q02750 393 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 CXCL9Q07325 125 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 PIGFQ07326 219 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 BOP1Q14137 746 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 TAF7Q15545 349 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC5A9Q2M3M2 681 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 DEFB115Q30KQ5 88 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 PARP10Q53GL7 1025 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 PLA1AQ53H76 456 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 ARHGAP15Q53QZ3 475 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 FBXO47Q5MNV8 452 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 LIN54Q6MZP7 749 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MRNIPQ6NTE8 343 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MZT2AQ6P582 158 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 CRTC1Q6UUV9 634 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 GATAD2AQ86YP4 633 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 NAXEQ8NCW5 288 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 POC1BQ8TC44 478 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 SPPL3Q8TCT6 385 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 OTUD7AQ8TE49 926 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 RSC1A1Q92681 617 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 REPS1Q96D71 796 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MPP4Q96JB8 637 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 ZSCAN31Q96LW9 406 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 SMOQ99835 787 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 THUMPD2Q9BTF0 503 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 TLR10Q9BXR5 811 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 SEMA4CQ9C0C4 833 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 PCDHAC1Q9H158 963 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 AS3MTQ9HBK9 375 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 ZBTB26Q9HCK0 441 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MRPS18AQ9NVS2 196 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 WWOXQ9NZC7 414 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 MDFICQ9P1T7 246 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 DNMT3BQ9UBC3 853 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 HERC5Q9UII4 1024 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 SCAF8Q9UPN6 1271 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 SHOC2Q9UQ13 582 aa2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 COL1A1P02452 1464 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-208ENST00000634926 TCF20Q9UGU0 1960 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SMIM35A0A1B0GVV1 85 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 OR2W5A6NFC9 320 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 KCNU1A8MYU2 1149 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 E7ENX8 843 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 H7C4K7 107 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 EIF3FO00303 357 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 CHL1O00533 1208 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 DCLK1O15075 740 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 COQ9O75208 318 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 VPS4BO75351 444 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SOAT2O75908 522 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 FAM155BO75949 473 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TNFRSF6BO95407 300 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 PYGLP06737 847 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ITGA2BP08514 1039 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ZNF853P0CG23 659 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 NPPBP16860 134 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 DRD4P21917 467 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 GPTP24298 496 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 CST5P28325 142 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 LRPAP1P30533 357 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms