RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 PPIDQ08752 370 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 SEMA3BQ13214 749 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 PCLAFQ15004 111 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ARL13BQ3SXY8 428 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SYPL2Q5VXT5 272 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 C16orf46Q6P387 395 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ZCCHC23Q6ZST2 131 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SCUBE1Q8IWY4 988 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
GPC3-204ENST00000631057 RBM15BQ8NDT2 890 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 ISL2Q96A47 359 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 PGAP3Q96FM1 320 aaPredicted RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 PPP1R10Q96QC0 940 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 VAT1Q99536 393 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SYT15Q9BQS2 421 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 KATNAL1Q9BW62 490 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 CEP41Q9BYV8 373 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ULBP1Q9BZM6 244 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 AP5M1Q9H0R1 490 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 GBA3Q9H227 469 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 C1orf21Q9H246 121 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 CASS4Q9NQ75 786 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 DNAJC28Q9NX36 388 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SLC17A6Q9P2U8 582 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 STX18Q9P2W9 335 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 ZNF212Q9UDV6 495 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 FBXW11Q9UKB1 542 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ANGPTL2Q9UKU9 493 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 VANGL2Q9ULK5 521 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 PLA2G4CQ9UP65 541 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 APOBEC2Q9Y235 224 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 NR2E3Q9Y5X4 410 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 MAGEB16A2A368 324 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 C17orf102A2RUQ5 167 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 AP3B1O00203 1094 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 PTGESO14684 152 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 PSMD3O43242 534 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 TREHO43280 583 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 H2AFYO75367 372 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 TM7SF2O76062 418 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 BEST1O76090 585 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 USP1O94782 785 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 TOP3BO95985 862 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 F9P00740 461 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 LTFP02788 710 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 MPOP05164 745 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 MYL3P08590 195 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ERVK-10P10266 1014 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 RALBP11234 206 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 CPA3P15088 417 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ALOX15P16050 662 aaPredicted RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 ERCC2P18074 760 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 CYP2B6P20813 491 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 DNAJB2P25686 324 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 MLH1P40692 756 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 HADHAP40939 763 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 CPA2P48052 419 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 NPY2RP49146 381 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 LIMK2P53671 638 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 CSE1LP55060 971 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 SESN3P58005 492 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ABCE1P61221 599 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 COG7P83436 770 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 MXRA7P84157 204 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 KDSRQ06136 332 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 THOC5Q13769 683 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 TRIM68Q6AZZ1 485 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 LRRC74BQ6ZQY2 392 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 HFE2Q6ZVN8 426 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 FAM35AQ86V20 835 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 C10orf107Q8IVU9 208 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ARRDC4Q8NCT1 418 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 PPFIBP2Q8ND30 876 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 OR52K1Q8NGK4 314 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 WDR60Q8WVS4 1066 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ZNF669Q96BR6 464 aaPredicted RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 HDAC11Q96DB2 347 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ZNF333Q96JL9 665 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 SENP8Q96LD8 212 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ZNF778Q96MU6 729 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 RBBP8Q99708 897 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 C20orf27Q9GZN8 174 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 ZNF408Q9H9D4 720 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 WDR6Q9NNW5 1121 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 TMPRSS4Q9NRS4 437 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 SNX15Q9NRS6 342 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 PIH1D1Q9NWS0 290 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 NMRK1Q9NWW6 199 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 NSMCE4AQ9NXX6 385 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 DDX43Q9NXZ2 648 aaKnown RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 COPG2Q9UBF2 871 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 MID2Q9UJV3 735 aa8.25□□□□□ -1.09
GPC3-204ENST00000631057 CORO1CQ9ULV4 474 aaPredicted RBP8.25□□□□□ -1.09
GPC3-204ENST00000631057 PTCH2Q9Y6C5 1203 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms