RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 PCDH17O14917 1159 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 DENND4BO75064 1496 aaPredicted RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 PIAS2O75928 621 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 GFPT2O94808 682 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 RASAL1O95294 804 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 TK1P04183 234 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 SRGAP2BP0DMP2 458 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 MST1P26927 711 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 PXNP49023 591 aaPredicted RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 TUBP50607 506 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 CLNS1AP54105 237 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 PNLIPRP1P54315 467 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 BCAT1P54687 386 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 POU5F1Q01860 360 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 CFHR1Q03591 330 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 GPS1Q13098 491 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 TCOF1Q13428 1488 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 IQCB1Q15051 598 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 CYP1B1Q16678 543 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 MGAT5BQ3V5L5 792 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 DAB2IPQ5VWQ8 1189 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 SPATA1Q5VX52 437 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 RGS7BPQ6MZT1 257 aaPredicted RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 LAYNQ6UX15 382 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 COLCA1Q6ZS62 124 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 KIAA0408Q6ZU52 694 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 RRAGAQ7L523 313 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 RAB11FIP2Q7L804 512 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 FASTKD5Q7L8L6 764 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 RASGRP3Q8IV61 690 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 HERC6Q8IVU3 1022 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS8-228ENST00000628962 NRSN1Q8IZ57 195 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 TMEM57Q8N5G2 664 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 NGDNQ8NEJ9 315 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 OR1N1Q8NGS0 311 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 OR6Y1Q8NGX8 325 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 ARHGEF40Q8TER5 1519 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 C3orf49Q96BT1 292 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 ZFYVE19Q96K21 471 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 DDX23Q9BUQ8 820 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 BRD8Q9H0E9 1235 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 TP63Q9H3D4 680 aaPredicted RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 FAM83DQ9H4H8 585 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 EPS8L2Q9H6S3 715 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 ZBTB26Q9HCK0 441 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 HELLSQ9NRZ9 838 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 TFCP2L1Q9NZI6 479 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 TMOD4Q9NZQ9 345 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 LPAR3Q9UBY5 353 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 NDRG4Q9ULP0 352 aaKnown RBP3.57□□□□□ -1.84
VPS8-228ENST00000628962 SHOC2Q9UQ13 582 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 RAPGEF2Q9Y4G8 1499 aa3.57□□□□□ -1.84
VPS8-228ENST00000628962 FSD2A1L4K1 749 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 H0Y3Z8 333 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 DNPH1O43598 174 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 RGS10O43665 173 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 RRP9O43818 475 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 SLC28A2O43868 658 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 CCNT2O60583 730 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 TULP3O75386 442 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 KRT38O76015 456 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 DDX58O95786 925 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 VIPP01282 170 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 PRKCBP05771 671 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 TGFB3P10600 412 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 MYCLP12524 364 aaPredicted RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 NR1H2P55055 460 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 LILRA4P59901 499 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 E2F2Q14209 437 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 KCNAB1Q14722 419 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 RPS6KA2Q15349 733 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 GPATCH4Q5T3I0 446 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 TTC30AQ86WT1 665 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 GAS2L3Q86XJ1 694 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 TSPYL6Q8N831 410 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 SCAMP5Q8TAC9 235 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 CSGALNACT1Q8TDX6 532 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 IGFBPL1Q8WX77 278 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 CENPIQ92674 756 aaPredicted RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 HVCN1Q96D96 273 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 NUDT16L1Q9BRJ7 211 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 CHCHD6Q9BRQ6 235 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 GPR63Q9BZJ6 419 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 SLC25A32Q9H2D1 315 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 ELAC1Q9H777 363 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 PREBQ9HCU5 417 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 ZBTB40Q9NUA8 1239 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 HPSEQ9Y251 543 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 RRP7AQ9Y3A4 280 aaKnown RBP3.56□□□□□ -1.84
VPS8-228ENST00000628962 DTNAQ9Y4J8 743 aa3.56□□□□□ -1.84
VPS8-228ENST00000628962 KIAA0556O60303 1618 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 CPS1P31327 1500 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 ATP10AO60312 1499 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 ZBED4O75132 1171 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 GCATO75600 419 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 CSF1RP07333 972 aa3.55□□□□□ -1.84
VPS8-228ENST00000628962 HNRNPA1P09651 372 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS8-228ENST00000628962 PTMSP20962 102 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms