RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SMG5Q9UPR3 1016 aaKnown RBP14.4□□□□□ -0.1
SNRPA1-216ENST00000626000 CKAP5Q14008 2032 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 A0A1W2PQF6 199 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 TARSL2A2RTX5 802 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 ATMINO43313 823 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 RNASEH1O60930 286 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 SRGAP2O75044 1071 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 RHOBTB1O94844 696 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 GJB6O95452 261 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 EPHX1P07099 455 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 TMEM253P0C7T8 217 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 C7P10643 843 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 CDC25BP30305 580 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 IL12RB1P42701 662 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 CLCN6P51797 869 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 GALCP54803 685 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 ADKP55263 362 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 GFPT1Q06210 699 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 SLC20A2Q08357 652 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 CAMK2GQ13555 558 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 ASTE1Q2TB18 679 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 BOLA3Q53S33 107 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 FSCBQ5H9T9 825 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 TMEM215Q68D42 235 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 RETSATQ6NUM9 610 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 DSG4Q86SJ6 1040 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 RHOT2Q8IXI1 618 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 MYEOVQ96EZ4 313 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 CCDC114Q96M63 670 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 FEM1AQ9BSK4 669 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 ANLNQ9NQW6 1124 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 C2orf42Q9NWW7 574 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 NENFQ9UMX5 172 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 DOCK4Q8N1I0 1966 aa14.39□□□□□ -0.11
SNRPA1-216ENST00000626000 MUC22E2RYF6 1773 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 EDDM13A0A1B0GTR0 161 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 PRR23AA6NEV1 266 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 I6L893 689 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 GFRA3O60609 400 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 LRP3O75074 770 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 LRIG2O94898 1065 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 GABRG2P18507 467 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 OXTRP30559 389 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 CYLC1P35663 651 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 HADHQ16836 314 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 PTPRNQ16849 979 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 SH3PXD2AQ5TCZ1 1133 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 C14orf80Q86SX3 495 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 CCDC185Q8N715 623 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 OR2T3Q8NH03 318 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 RUBCNQ92622 972 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 PRCCQ92733 491 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ZC3H10Q96K80 434 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 CALR3Q96L12 384 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ACOX2Q99424 681 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 MAGEH1Q9H213 219 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 PRDM16Q9HAZ2 1276 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 TMEM248Q9NWD8 314 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 NCDNQ9UBB6 729 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ANAPC7Q9UJX3 599 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 INTS6Q9UL03 887 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 HCN2Q9UL51 889 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 FZD10Q9ULW2 581 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ERVW-1Q9UQF0 538 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 PLXND1Q9Y4D7 1925 aa14.38□□□□□ -0.11
SNRPA1-216ENST00000626000 ZSCAN5CA6NGD5 496 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 ACADMP11310 421 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 PRKCHP24723 683 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 EPHB2P29323 1055 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 GGCXP38435 758 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 P2RY2P41231 377 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 WASP42768 502 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 MRE11P49959 708 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 YBEYP58557 167 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 OGDHQ02218 1023 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 DMWDQ09019 674 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 ELAVL3Q14576 367 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 SPA17Q15506 151 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 TTC31Q49AM3 519 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 ALFQ53S48 1182 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 PRR23BQ6ZRT6 265 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 TFAP2DQ7Z6R9 452 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 CIR1Q86X95 450 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 TXLNBQ8N3L3 684 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 RTL3Q8N8U3 475 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 TC2NQ8N9U0 490 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 CYB5D2Q8WUJ1 264 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms