RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 AIF1P55008 147 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 RPS7P62081 194 aaKnown RBP11.3□□□□□ -0.6
VPS8-227ENST00000625842 E2F4Q16254 413 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 ASB2Q96Q27 587 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 RBM15Q96T37 977 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS8-227ENST00000625842 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
VPS8-227ENST00000625842 DPY30Q9C005 99 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 NMRAL1Q9HBL8 299 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 COQ6Q9Y2Z9 468 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 CAPN14A8MX76 684 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 YBX3P16989 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS8-227ENST00000625842 CYP3A5P20815 502 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 GDI1P31150 447 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 GHRHRQ02643 423 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 GCNT1Q02742 428 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 CHST9Q7L1S5 443 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 CELF5Q8N6W0 485 aaKnown RBP11.3□□□□□ -0.6
VPS8-227ENST00000625842 DBF4BQ8NFT6 615 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 FERD3LQ96RJ6 166 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 CNGB3Q9NQW8 809 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 TMEM63CQ9P1W3 806 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
VPS8-227ENST00000625842 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PSMC3P17980 439 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 KDSRQ06136 332 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 RUNX1T1Q06455 604 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 SHROOM1Q2M3G4 852 aaPredicted RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 KLHL24Q6TFL4 600 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 ADGRG2Q8IZP9 1017 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 C7orf57Q8NEG2 295 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 ANKS1AQ92625 1134 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 CDCA3Q99618 268 aaPredicted RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 ACOT9Q9Y305 439 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 CHURC1-FNTBB4DL54 471 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 GTPBP1O00178 669 aaKnown RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 TRUB2O95900 331 aaKnown RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 GLI1P08151 1106 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 CLCN1P35523 988 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 ABL2P42684 1182 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 SARSP49591 514 aaKnown RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 ATXN7L2Q5T6C5 722 aaPredicted RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 OR10G6Q8NH81 332 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 DPEP2Q9H4A9 486 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 VWDEQ8N2E2 1590 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 KLHL2O95198 593 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 NOS3P29474 1203 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PSMD8P48556 350 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 CBX2Q14781 532 aaPredicted RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 CRY1Q16526 586 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 TFDP3Q5H9I0 405 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 LVRNQ6Q4G3 990 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 COMMD2Q86X83 199 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 DEFB106AQ8N104 65 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 LIX1Q8N485 282 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 GPAMQ9HCL2 828 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 MEGF6O75095 1541 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 MYO1GB0I1T2 1018 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 ITGAVP06756 1048 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 OAS2P29728 719 aaKnown RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 HTR7P34969 479 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 CD151P48509 253 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 LONRF1Q17RB8 773 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 C16orf89Q6UX73 402 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 RASGEF1AQ8N9B8 481 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 MYLPFQ96A32 169 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 SIPA1Q96FS4 1042 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 TKTL2Q9H0I9 626 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 RHBGQ9H310 441 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 POLR1BQ9H9Y6 1135 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PPIEQ9UNP9 301 aaKnown RBP11.29□□□□□ -0.6
VPS8-227ENST00000625842 ERVK-11Q9UQG0 969 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 TBC1D30Q9Y2I9 924 aa11.29□□□□□ -0.6
VPS8-227ENST00000625842 PRR5-ARHGAP8B1AHC4 643 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 TREHO43280 583 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 ACSM2AQ08AH3 577 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 ACSM2BQ68CK6 577 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 GALNT18Q6P9A2 607 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 MAP4K3Q8IVH8 894 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms