RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 PIN4Q9Y237 131 aaKnown RBP11.52□□□□□ -0.56
VARS2-213ENST00000625423 DCLK1O15075 740 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
VARS2-213ENST00000625423 CCNT2O60583 730 aaKnown RBP11.52□□□□□ -0.57
VARS2-213ENST00000625423 ZCCHC18P0CG32 403 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
VARS2-213ENST00000625423 ERCC2P18074 760 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 PTPN3P26045 913 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 SPRP35270 261 aaPredicted RBP11.52□□□□□ -0.57
VARS2-213ENST00000625423 CCDC153Q494R4 210 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 HSP90AA5PQ58FG0 334 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 THEMIS2Q5TEJ8 643 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 FRMD7Q6ZUT3 714 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
VARS2-213ENST00000625423 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
VARS2-213ENST00000625423 IFT43Q96FT9 208 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 COG4Q9H9E3 785 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 CDH22Q9UJ99 828 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 VANGL2Q9ULK5 521 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 STAP1Q9ULZ2 295 aa11.52□□□□□ -0.57
VARS2-213ENST00000625423 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 E9PBE3 544 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 KLHL41O60662 606 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 HSPA4LO95757 839 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SERPINB8P50452 374 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 LIMK2P53671 638 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CUL3Q13618 768 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 DGKDQ16760 1214 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 AAGABQ6PD74 315 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 BNIPLQ7Z465 357 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 DEFB107AQ8IZN7 70 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 HIPK4Q8NE63 616 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 OR6Y1Q8NGX8 325 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 WNT8BQ93098 351 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 MFSD3Q96ES6 412 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 HNRNPABQ99729 332 aaKnown RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 PRDM16Q9HAZ2 1276 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ANLNQ9NQW6 1124 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.575e-6■■■■■ 137.9
VARS2-213ENST00000625423 A0A096LPK6 155 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ZCWPW2A0A1B0GU75 182 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ZBTB14O43829 449 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ATP9BO43861 1147 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 AP2A1O95782 977 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 AMHP03971 560 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 MYL4P12829 197 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 DARSP14868 501 aaKnown RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 NPR3P17342 541 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ITGAXP20702 1163 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 MAGEA12P43365 314 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ASPHQ12797 758 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CCNIQ14094 377 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 GSTA3Q16772 222 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SLC9B1Q4ZJI4 515 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CFAP157Q5JU67 520 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CERCAMQ5T4B2 595 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 FOXB2Q5VYV0 432 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 PGM2L1Q6PCE3 622 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 PAQR9Q6ZVX9 377 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SIX6OS1Q8N1H7 587 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ACTRT2Q8TDY3 377 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 TMEM40Q8WWA1 233 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 MOCOSQ96EN8 888 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 APOL2Q9BQE5 337 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 BFARQ9NZS9 450 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 PCDHB12Q9Y5F1 795 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 G3V2L1 256 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 I6L893 689 aaPredicted RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 NRP1O14786 923 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ZBTB24O43167 697 aaPredicted RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 LYNP07948 512 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 ADRA1BP35368 520 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 PNPLA4P41247 253 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CDK7P50613 346 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 MAP3K7CLP57077 242 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 LILRA4P59901 499 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SV2CQ496J9 727 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ANKRD20A4Q4UJ75 823 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 TCHHL1Q5QJ38 904 aaPredicted RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 DHDDSQ86SQ9 333 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 HPS6Q86YV9 775 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ACVR1CQ8NER5 493 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ISL2Q96A47 359 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 NR1H4Q96RI1 486 aaPredicted RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 MED10Q9BTT4 135 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 CDH19Q9H159 772 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 ACSS2Q9NR19 701 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 SPATS2LQ9NUQ6 558 aaKnown RBP11.51□□□□□ -0.57
VARS2-213ENST00000625423 ADAM28Q9UKQ2 775 aa11.51□□□□□ -0.57
VARS2-213ENST00000625423 GOLGA8TH3BQL2 631 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 FYNP06241 537 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 FESP07332 822 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 TKTL1P51854 596 aa11.5□□□□□ -0.57
VARS2-213ENST00000625423 CCNA1P78396 465 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms