RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MORF4L2Q15014 288 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 KNOP1Q1ED39 458 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 LRIT3Q3SXY7 679 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 INO80DQ53TQ3 878 aaPredicted RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 HABP4Q5JVS0 413 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS11-209ENST00000622309 PDPK2PQ6A1A2 396 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 OTOP3Q7RTS5 596 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 SLC22A16Q86VW1 577 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 GPBP1Q86WP2 473 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 ZC3H3Q8IXZ2 948 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 ZCCHC7Q8N3Z6 543 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 ZSWIM2Q8NEG5 633 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 FNIP1Q8TF40 1166 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 CEP95Q96GE4 821 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 SH3YL1Q96HL8 342 aaPredicted RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 TXNDC15Q96J42 360 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 SERAC1Q96JX3 654 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 CITED4Q96RK1 184 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 UQCC2Q9BRT2 126 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 STN1Q9H668 368 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 SERPINB13Q9UIV8 391 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 PRPF19Q9UMS4 504 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 E9PMD0 336 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 DYRK3O43781 588 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 BANF1O75531 89 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 TOM1L1O75674 476 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 NADKO95544 446 aaPredicted RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 C7P10643 843 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 RALAP11233 206 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 COX4I1P13073 169 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 FGFR3P22607 806 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 PRDX5P30044 214 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 HADHAP40939 763 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 ECE1P42892 770 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 GPX6P59796 221 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 BFSP2Q13515 415 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 INSCQ1MX18 579 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 C16orf89Q6UX73 402 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 STRA8Q7Z7C7 330 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 SNX29P2Q8IUI4 249 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 TBCKQ8TEA7 893 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 TFB1MQ8WVM0 346 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 S100ZQ8WXG8 99 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 PMEPA1Q969W9 287 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 FAM84BQ96KN1 310 aaPredicted RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 PPP1R36Q96LQ0 422 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 NACC1Q96RE7 527 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 CDRT15Q96T59 188 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 TMEM121Q9BTD3 319 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 EFHD1Q9BUP0 239 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 CLPBQ9H078 707 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 CPVLQ9H3G5 476 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 ACSS3Q9H6R3 686 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 NANOGQ9H9S0 305 aa8.08□□□□□ -1.12
VPS11-209ENST00000622309 THG1LQ9NWX6 298 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 UBA2Q9UBT2 640 aaPredicted RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 EIF2B4Q9UI10 523 aaKnown RBP8.08□□□□□ -1.12
VPS11-209ENST00000622309 DENND3A2RUS2 1198 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 F5H6K3 240 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 FOXN3O00409 490 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 CLIC2O15247 247 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 DAB1O75553 588 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 GCATO75600 419 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 NR3C1P04150 777 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ZSCAN5DPP0CG00 497 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 CYP2D6P10635 497 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RPL17P18621 184 aaKnown RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 KLRC2P26717 231 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 MAPK4P31152 587 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 CASP4P49662 377 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SEPHS1P49903 392 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 NUDT2P50583 147 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 GALNT2Q10471 571 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 GALNT1Q10472 559 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 C6orf10Q5SRN2 563 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 CIAPIN1Q6FI81 312 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 BNC2Q6ZN30 1099 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 KCTD8Q6ZWB6 473 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ARMC8Q8IUR7 673 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 ABHD11Q8NFV4 315 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 DCAKDQ8WVC6 231 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 VPS33AQ96AX1 596 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 NRBF2Q96F24 287 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SLC29A1Q99808 456 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 BRIP1Q9BX63 1249 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ANKRD60Q9BZ19 345 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SLC13A1Q9BZW2 595 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 C6orf50Q9HD87 102 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 PSME2Q9UL46 239 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 PRSS51A0A1B0GVH4 220 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 POLR1CO15160 346 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 ZNF254O75437 659 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms